Parental gene: | USP21, ENSECAG00000016189 |
| Aliases: | None |
| Description: | ubiquitin specific peptidase 21 [Source:HGNC Symbol;Acc:12620] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 5:35840709..35847059(+) |
>ENSECAG00000016189
ATGCCCCAGGCCTCTGAGCATCGCCTGGGCCGGACCCGAGAGCCACCTCTTAATGTCCAGCCCAGAGTGGGATCCAAACT
ATCATTTGCTCCCCGGGCCCGCAGCAAGGAGCGCCGAAACCCAGCCCCTGGGCCGAACCCCATGTTACGACCTCTGCCTC
CCCGGCCAGGTCCTCCTGAGGAACGGCTCAAGAAACTGGAGCTGGGACGAGGACGGACCTCAGGCCCTCGTCCCAGAGGC
CCTCTTCGGGCAGATCATGGAGTTCCCCTTCCTGGCTCACCACCCCCAACTGTGGCTCTGCCTGTCCCATCTAGGACCAA
CCTAACCCGTTCCAAGTCTGTGAGCAGTGGAGACTTGCGTCCAATGGGGATTGCCTTGGGAGGGCATCGTGGTGCCGCAG
AGCTAGGGGCTGCACTGAGCCGCTTGGCACTCCGACCTGAACCACCCATCTTGAGACGTAGCACCTCTCTCCGCCGCCTT
GGGGGCTTTCCTGGGCCCCCTACCTTGCTCAGCATACGGACGGAGCCCCCTGCTTCCCATGGCTCCTTCCATGTGATATC
TGGCCGGCCCTCTGAGCCTTTCTACTTCGATGACAAGATGGCTCACCACACACTGCTCCTGGGCTCTGGTCATGTTGGCC
TCCGAAATCTGGGAAACACGTGCTTCCTGAATGCTGTGCTGCAGTGTTTGAGCAGCACTCGGCCTCTTCGGGACTTCTGT
CTGCGAAGGGACTTCCGGCAAGAGGTGCCTGGAGGGGGCCGAGCCCAAGAGCTCACTGAAGCCTTTGCAGATGTGATTGG
TGCCCTGTGGCACCCTGACTCCTGCGAAGCTGTGAATCCTACTCGATTCCGCGCTGTCTTCCAGAAATATGTTCCCTCCT
TCTCTGGATACAGCCAGCAGGATGCCCAAGAGTTCCTGAAGCTCCTCATGGAGCGGCTGCACCTTGAAATCAACCGACGA
GGCCGCCGGGCTCCACCAATCTTGGCCAACAGTCCAGCTCCCTCTCCACCCCGCCGCGGAGGGGCTCTGCTAGAAGAACC
TGAGTTAAGTGATGATGACCGAGCCAACCTAATGTGGAAGCGTTACCTGGAGCGAGAGGACAGCAAGATTGTGGACCTGT
TTGTGGGCCAGTTGAAAAGTTGTCTCAAGTGCCAGGCCTGTGGGTATCGCTCCACGACCTTCGAGGTTTTTTGTGACCTG
TCCCTGCCCATCCCCAAGAAAGGATTTGCTGGGGGCAAGGTGTCTCTGCGGGATTGTTTCAGCCTTTTCACCAAGGAAGA
AGAGCTAGAATCGGAGAATGCCCCAGTGTGTGACCGATGTCGGCAGAAAACACGAAGTACTAAAAAGTTGACAGTACAAA
GATTCCCCCGAATCCTTGTGCTCCATCTTAATCGATTTTCCGCCTCCCGAGGCTCCATCAAGAAAAGTTCAATAGGTGTA
GACTTCCCACTGCAGCGACTGAGCCTAGGGGACTTCGCCAGTGACAAAGCTGGTGACCCCATCTATCAGCTGTATGCCCT
TTGCAACCACTCGGGCAGCGTCCACTATGGCCACTACACAGCCCTGTGCCGGTGCCAGACTGGTTGGCATGTCTACAATG
ACTCTCGTGTCTCCCCTGTCAGTGAAAACCAGGTGGCATCCAGTGAAGGCTACGTGCTGTTCTACCAACTGATGCAGGAG
CCACCCCGGTGCCTGTGA
ATGCCCCAGGCCTCTGAGCATCGCCTGGGCCGGACCCGAGAGCCACCTCTTAATGTCCAGCCCAGAGTGGGATCCAAACT
ATCATTTGCTCCCCGGGCCCGCAGCAAGGAGCGCCGAAACCCAGCCCCTGGGCCGAACCCCATGTTACGACCTCTGCCTC
CCCGGCCAGGTCCTCCTGAGGAACGGCTCAAGAAACTGGAGCTGGGACGAGGACGGACCTCAGGCCCTCGTCCCAGAGGC
CCTCTTCGGGCAGATCATGGAGTTCCCCTTCCTGGCTCACCACCCCCAACTGTGGCTCTGCCTGTCCCATCTAGGACCAA
CCTAACCCGTTCCAAGTCTGTGAGCAGTGGAGACTTGCGTCCAATGGGGATTGCCTTGGGAGGGCATCGTGGTGCCGCAG
AGCTAGGGGCTGCACTGAGCCGCTTGGCACTCCGACCTGAACCACCCATCTTGAGACGTAGCACCTCTCTCCGCCGCCTT
GGGGGCTTTCCTGGGCCCCCTACCTTGCTCAGCATACGGACGGAGCCCCCTGCTTCCCATGGCTCCTTCCATGTGATATC
TGGCCGGCCCTCTGAGCCTTTCTACTTCGATGACAAGATGGCTCACCACACACTGCTCCTGGGCTCTGGTCATGTTGGCC
TCCGAAATCTGGGAAACACGTGCTTCCTGAATGCTGTGCTGCAGTGTTTGAGCAGCACTCGGCCTCTTCGGGACTTCTGT
CTGCGAAGGGACTTCCGGCAAGAGGTGCCTGGAGGGGGCCGAGCCCAAGAGCTCACTGAAGCCTTTGCAGATGTGATTGG
TGCCCTGTGGCACCCTGACTCCTGCGAAGCTGTGAATCCTACTCGATTCCGCGCTGTCTTCCAGAAATATGTTCCCTCCT
TCTCTGGATACAGCCAGCAGGATGCCCAAGAGTTCCTGAAGCTCCTCATGGAGCGGCTGCACCTTGAAATCAACCGACGA
GGCCGCCGGGCTCCACCAATCTTGGCCAACAGTCCAGCTCCCTCTCCACCCCGCCGCGGAGGGGCTCTGCTAGAAGAACC
TGAGTTAAGTGATGATGACCGAGCCAACCTAATGTGGAAGCGTTACCTGGAGCGAGAGGACAGCAAGATTGTGGACCTGT
TTGTGGGCCAGTTGAAAAGTTGTCTCAAGTGCCAGGCCTGTGGGTATCGCTCCACGACCTTCGAGGTTTTTTGTGACCTG
TCCCTGCCCATCCCCAAGAAAGGATTTGCTGGGGGCAAGGTGTCTCTGCGGGATTGTTTCAGCCTTTTCACCAAGGAAGA
AGAGCTAGAATCGGAGAATGCCCCAGTGTGTGACCGATGTCGGCAGAAAACACGAAGTACTAAAAAGTTGACAGTACAAA
GATTCCCCCGAATCCTTGTGCTCCATCTTAATCGATTTTCCGCCTCCCGAGGCTCCATCAAGAAAAGTTCAATAGGTGTA
GACTTCCCACTGCAGCGACTGAGCCTAGGGGACTTCGCCAGTGACAAAGCTGGTGACCCCATCTATCAGCTGTATGCCCT
TTGCAACCACTCGGGCAGCGTCCACTATGGCCACTACACAGCCCTGTGCCGGTGCCAGACTGGTTGGCATGTCTACAATG
ACTCTCGTGTCTCCCCTGTCAGTGAAAACCAGGTGGCATCCAGTGAAGGCTACGTGCTGTTCTACCAACTGATGCAGGAG
CCACCCCGGTGCCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 16 .11 RPM |
| SRP021940_embryo | 39 .33 RPM |
| SRP021940_cerebellum | 20 .77 RPM |
| SRP021940_testis | 35 .94 RPM |
| SRP021940_placental_villous | 8 .56 RPM |
| SRP021940_articular_cartilage | 4 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000014052 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_260 | 81.04 | 90.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000016189 retrocopies