Parental gene: | ENSECAG00000016242 |
| Aliases: | None |
| Description: | Tuftelin-interacting protein 11 [Source:UniProtKB/TrEMBL;Acc:F6TXE8] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 8:9783533..9796952(+) |
>ENSECAG00000016242
ATGTCGCTGTCCCACTTGTACCGGGACGGGGAAGGCCGCATGGATGATGACGACGACGAGCGGGAGAACTTCGAGATCAC
CGACTGGGATCTCCAGAATGAATTCAACCCCAACCGGCAGCGCCACTGGCAGACCAAGGAAGAGGCCACCTACGGAGTGT
GGGCAGAGCGAGACTCGGATGAAGAGAGGCCCAGCTTTGGAGGCAAACGGGCCCGTGACTACTCAGCGCCAGTCAACTTC
ATCAGCGCAGGGCTCAAGAAGGGGGCAGCAGAGGAGGCGGAGCTGGAAGATTCCGATGATGAAGAGAAGCCTGTTAAGCA
GGATGACTTTCCTAAGGATTACGGACCCAAGAAGTTAAAAACGGGAGGGAATTTTAAACCCAGCCAGAAAGGCTTTGCTG
GCGGAACCAAGTCTTTCATGGATTTTGGCAGCTGGGAGAGACACACAAAAGGAATTGGACACAAGCTTCTCCAGAAGATG
GGCTATGTCCCCGGGAGGGGCCTCGGGAAGAATGCTCAAGGTATCATCAACCCGATCGAAGCCAAGCAGAGAAAGGGCAA
AGGCGCTGTGGGGGCCTACGGCTCCGAGCGCACCCCCCAGGCCCTGCAGGACTTCCCCGTGGTCGACTCAGAGGAGGAGG
CCGAGGAGGAGTTTCAGAAGGAGCTGAGCCAGTGGAGGAAAGACCCCAGCGGAAGCAAGAAGAAGCCCAAATACTCTTAC
AAGACCGTGGAAGAGCTGAAGGCCAAGGGCCGGGTTAGCAAGAAGCTCACCGCCCCCCAGAAGGAGCTTTCTCAGGTCAA
GGTCATAGACATGACGGGCCGCGAGCAGAAGGTGTACTACAGCTACAGCCAGATCAGCCACAAGCACAGCGTCCCCGACG
ACGGGCTGCCGCTGCAGTCGCCGCAGCCACCGCAGCCCGGCAAGGAGGCCAAGGCCCCGGGCTTCGCGCTGCCCGAGCTG
GAGCACAACCTGCAGCTGCTCATCGACCTCACGGAGCAGGAGATCATCCAGAACGACCGGCAGCTGCAGTACGAGCGGGA
CATGGTGGTGAACCTCTCCCACGAGCTGGAGAAGATGTCGGAGGTCCTGGACCACGAGGAGCGGCTCATCTCCAACCTCA
GCAAGGTCCTGGAGATGGTGGAGGAGTGCGAGCGGCGTATGCAGCCCAACTGCAGCGACCCCCTCACCCTGGACGAGTGC
GCCCGCGTCTTTGAGACCCTGCAGGACAAGTACTACGAGGAGTACCGCATGTCCGACCGCGTGGACCTCGCCGTGGCCAT
CGTCTACCCACTCATGAAGGAGTACTTCAAGGAGTGGGACCCCCTCAAAGACTGTACTTACGGCACCGAGATCATCTCCA
AGTGGAAGAGCCTCCTGGAGAATGACCAGCTCCTGTCGCACGGCGGGCAGGACCTCTCGGCGGACGCCTTTCACAGGCTC
ATTTGGGAAGTCTGGATGCCTTTCGTTCGAAACATTGTCACCCAGTGGCAACCAAGGAACTGTGACCCAATGGTGGACTT
TTTGGATAGCTGGGTGCACATTATCCCCGTGTGGATCCTAGATAACATCCTGGACCAGCTCATCTTCCCCAAGCTGCAGA
AGGAGGTGGAGAACTGGAACCCACTGACGGACACGGTCCCCATCCACTCCTGGATCCACCCGTGGCTGCCCCTCATGCAG
GCGCGCCTGGAGCCACTCTACTCCCCCATCCGCAGCAAGCTGTCCAGCGCCCTGCAGAAGTGGCACCCCAGCGACTCCTC
GGCCAAGCTCATCCTGCAGCCCTGGAAGGAGGTCTTCACACCCGGCTCCTGGGAAGCATTCATGGTCAAGAACATAGTGC
CCAAGCTGGGGATGTGTCTTGGGGAGCTGGTCATCAACCCCCACCAGCAGCACATGGACGCCTTTTACTGGGTCATCGAC
TGGGAAGGGATGATCTCCGTCTCCAGCCTCGTGGGCCTTCTGGAAAAGCACTTCTTCCCCAAGTGGCTTCAGGTGCTGTG
CTCCTGGCTCAGTAACAGCCCCAATTATGAGGAGATCACCAAGTGGTACCTGGGTTGGAAGTCCATGTTCTCAGACCAAG
TGCTGGCACACCCGTCCGTCAAGGACAAATTTAACGAAGCACTTGACATCATGAACAGGGCCGTGTCCTCCAATGTGGGG
GCCTACATGCAGCCCGGAGCGCGGGAGAACATTGCCTACCTCACCCACACGGAGCGGAGGAAGGACTTCCAGTATGAGGC
CATGCAGGAGCGACGGGAGGCTGAGAACATGGCCCAGAGGGGCATTGGCGTGGCCGCCAGCTCCGTGCCCATGAACTTTA
AGGACCTCATTGAGACCAAGGCCGAGGAGCACAACATCGTCTTCATGCCCGTCATCGGGAAGCGGCACGAAGGGAAGCAG
CTCTACACCTTCGGCCGCATCGTCATCTACATCGACCGGGGAGTGGTCTTCGTCCAGGGCGAGAAGACCTGGGTGCCCAC
CTCCCTGCAGAGCCTGATTGACATGGCCAAGTAG
ATGTCGCTGTCCCACTTGTACCGGGACGGGGAAGGCCGCATGGATGATGACGACGACGAGCGGGAGAACTTCGAGATCAC
CGACTGGGATCTCCAGAATGAATTCAACCCCAACCGGCAGCGCCACTGGCAGACCAAGGAAGAGGCCACCTACGGAGTGT
GGGCAGAGCGAGACTCGGATGAAGAGAGGCCCAGCTTTGGAGGCAAACGGGCCCGTGACTACTCAGCGCCAGTCAACTTC
ATCAGCGCAGGGCTCAAGAAGGGGGCAGCAGAGGAGGCGGAGCTGGAAGATTCCGATGATGAAGAGAAGCCTGTTAAGCA
GGATGACTTTCCTAAGGATTACGGACCCAAGAAGTTAAAAACGGGAGGGAATTTTAAACCCAGCCAGAAAGGCTTTGCTG
GCGGAACCAAGTCTTTCATGGATTTTGGCAGCTGGGAGAGACACACAAAAGGAATTGGACACAAGCTTCTCCAGAAGATG
GGCTATGTCCCCGGGAGGGGCCTCGGGAAGAATGCTCAAGGTATCATCAACCCGATCGAAGCCAAGCAGAGAAAGGGCAA
AGGCGCTGTGGGGGCCTACGGCTCCGAGCGCACCCCCCAGGCCCTGCAGGACTTCCCCGTGGTCGACTCAGAGGAGGAGG
CCGAGGAGGAGTTTCAGAAGGAGCTGAGCCAGTGGAGGAAAGACCCCAGCGGAAGCAAGAAGAAGCCCAAATACTCTTAC
AAGACCGTGGAAGAGCTGAAGGCCAAGGGCCGGGTTAGCAAGAAGCTCACCGCCCCCCAGAAGGAGCTTTCTCAGGTCAA
GGTCATAGACATGACGGGCCGCGAGCAGAAGGTGTACTACAGCTACAGCCAGATCAGCCACAAGCACAGCGTCCCCGACG
ACGGGCTGCCGCTGCAGTCGCCGCAGCCACCGCAGCCCGGCAAGGAGGCCAAGGCCCCGGGCTTCGCGCTGCCCGAGCTG
GAGCACAACCTGCAGCTGCTCATCGACCTCACGGAGCAGGAGATCATCCAGAACGACCGGCAGCTGCAGTACGAGCGGGA
CATGGTGGTGAACCTCTCCCACGAGCTGGAGAAGATGTCGGAGGTCCTGGACCACGAGGAGCGGCTCATCTCCAACCTCA
GCAAGGTCCTGGAGATGGTGGAGGAGTGCGAGCGGCGTATGCAGCCCAACTGCAGCGACCCCCTCACCCTGGACGAGTGC
GCCCGCGTCTTTGAGACCCTGCAGGACAAGTACTACGAGGAGTACCGCATGTCCGACCGCGTGGACCTCGCCGTGGCCAT
CGTCTACCCACTCATGAAGGAGTACTTCAAGGAGTGGGACCCCCTCAAAGACTGTACTTACGGCACCGAGATCATCTCCA
AGTGGAAGAGCCTCCTGGAGAATGACCAGCTCCTGTCGCACGGCGGGCAGGACCTCTCGGCGGACGCCTTTCACAGGCTC
ATTTGGGAAGTCTGGATGCCTTTCGTTCGAAACATTGTCACCCAGTGGCAACCAAGGAACTGTGACCCAATGGTGGACTT
TTTGGATAGCTGGGTGCACATTATCCCCGTGTGGATCCTAGATAACATCCTGGACCAGCTCATCTTCCCCAAGCTGCAGA
AGGAGGTGGAGAACTGGAACCCACTGACGGACACGGTCCCCATCCACTCCTGGATCCACCCGTGGCTGCCCCTCATGCAG
GCGCGCCTGGAGCCACTCTACTCCCCCATCCGCAGCAAGCTGTCCAGCGCCCTGCAGAAGTGGCACCCCAGCGACTCCTC
GGCCAAGCTCATCCTGCAGCCCTGGAAGGAGGTCTTCACACCCGGCTCCTGGGAAGCATTCATGGTCAAGAACATAGTGC
CCAAGCTGGGGATGTGTCTTGGGGAGCTGGTCATCAACCCCCACCAGCAGCACATGGACGCCTTTTACTGGGTCATCGAC
TGGGAAGGGATGATCTCCGTCTCCAGCCTCGTGGGCCTTCTGGAAAAGCACTTCTTCCCCAAGTGGCTTCAGGTGCTGTG
CTCCTGGCTCAGTAACAGCCCCAATTATGAGGAGATCACCAAGTGGTACCTGGGTTGGAAGTCCATGTTCTCAGACCAAG
TGCTGGCACACCCGTCCGTCAAGGACAAATTTAACGAAGCACTTGACATCATGAACAGGGCCGTGTCCTCCAATGTGGGG
GCCTACATGCAGCCCGGAGCGCGGGAGAACATTGCCTACCTCACCCACACGGAGCGGAGGAAGGACTTCCAGTATGAGGC
CATGCAGGAGCGACGGGAGGCTGAGAACATGGCCCAGAGGGGCATTGGCGTGGCCGCCAGCTCCGTGCCCATGAACTTTA
AGGACCTCATTGAGACCAAGGCCGAGGAGCACAACATCGTCTTCATGCCCGTCATCGGGAAGCGGCACGAAGGGAAGCAG
CTCTACACCTTCGGCCGCATCGTCATCTACATCGACCGGGGAGTGGTCTTCGTCCAGGGCGAGAAGACCTGGGTGCCCAC
CTCCCTGCAGAGCCTGATTGACATGGCCAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 122 .55 RPM |
| SRP021940_embryo | 143 .95 RPM |
| SRP021940_cerebellum | 92 .96 RPM |
| SRP021940_testis | 120 .98 RPM |
| SRP021940_placental_villous | 96 .41 RPM |
| SRP021940_articular_cartilage | 28 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000008015 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010710 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_65 | 92.23 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000016242 retrocopies