Parental gene: | CNOT6, ENSECAG00000019325 |
| Aliases: | None |
| Description: | CCR4-NOT transcription complex, subunit 6 [Source:HGNC Symbol;Acc:14099] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 14:2057588..2098446(-) |
>ENSECAG00000019325
ACAGGCATGCCCAAAGAAAAATACGAGCCCCCTGACCCTCGGAGGATGTACACAATTATGTCCTCCGAGGAAGCAGCAAA
TGGAAAGAAATCACATTGGGCAGAGCTTGAAATAAGTGGAAAAGTAAGAAGCTTAAGCTCATCTTTGTGGTCACTAACTC
ACCTGACAGCTTTGCATCTGAGTGACAATTCCCTGTCCCGTATTCCTTCAGACATTGCCAAGCTTCACAATCTGGTGTAT
CTGGACCTGTCTTCTAATAAAATCCGGAGTTTACCGGCAGAACTCGGAAACATGGTATCACTCAGGGAACTCCATTTAAA
TAACAACCTGTTACGAGTTCTACCTTTTGAGCTGGGAAAACTGTTTCAGTTGCAGACTTTAGGCCTGAAAGGAAATCCAC
TTACCCAAGATATATTGAACCTCTATTTGGAACCAGATGGAACAAGAAGGCTACTGAACTATTTGCTTGATAATTTGGCA
GGTACTGCAAAAAGAATTTCAACAGAACAACCACCTCCAAGATCTTGGATTATGTTACAAGAACCAGACAGAACAAGGCC
TACTGCCTTGTTTTCTGTCATGTGCTACAATGTTCTTTGTGATAAATACGCGACCCGGCAGTTATACGGCTACTGTCCAT
CATGGGCGCTAAACTGGGACTACAGGAAAAAGGCCATTATTCAAGAAATCTTGAGCTGCAATGCTGATATCGTAAGTCTT
CAGGAGGTTGAAACAGAACAGTATTACAGTTTTTTTCTGGTAGAACTGAAAGAACGTGGCTATAATGGATTCTTTAGTCC
TAAATCTAGAGCTAGGACAATGTCAGAACAAGAAAGAAAACATGTTGATGGCTGTGCAATATTCTTCAAGACAGAAAAAT
TTACTTTGGTTCAGAAACACACTGTTGAATTTAATCAGCTAGCGATGGCAAATTCAGAAGGGTCTGAAGCTATGCTGAAC
AGAGTCATGACAAAAGATAACATTGGAGTTGCAGTACTGCTAGAACTTCGAAAGGAATTGATTGAAATGTCATCTGGAAA
ACCACATCTCGGAACAGAAAAACAACTGATTCTTGTGGCTAATGCTCATATGCATTGGGACCCTGAATACTCTGATGTGA
AGTTGGTTCAGACAATGATGTTCCTCTCAGAAGTGAAGAACATTATTGACAAAGCCTCACGGAGCCTCCAGTCCAGTGTG
TTGGGAGAGTTTGGAGCTATTCCACTGGTGTTGTGTGCAGATCTTAATTCTTTGCCAGACTCTGGTGTTGTAGAATATTT
GAGCACTGGTGGAGTAGAAACAAACCATAAAGACTTTAAGGAGCTGAGATATAATGAAAGTCTTACAAACTTCAGCTGCA
ATGGGAAAAATGGGACGACCAATGGCAGGATCACGCATGGGTTCAAGTTAAAGAGTGCCTACGAGAGTGGCCTGATGCCC
TACACGAACTACACCTTCGATTTCAAGGGTATAATTGACTACATCTTTTACTCTAAACCTCAGCTGAACACTTTAGGCAT
CCTGGGACCTCTGGATCACCATTGGCTAGTTGAGAATAATATCAGCGGCTGCCCACACCCACTCATCCCCTCTGATCACT
TCTCACTTTTTGCACAACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTTAACGGCATTCACCTTCCCAGCAGGAGGTAG
ACAGGCATGCCCAAAGAAAAATACGAGCCCCCTGACCCTCGGAGGATGTACACAATTATGTCCTCCGAGGAAGCAGCAAA
TGGAAAGAAATCACATTGGGCAGAGCTTGAAATAAGTGGAAAAGTAAGAAGCTTAAGCTCATCTTTGTGGTCACTAACTC
ACCTGACAGCTTTGCATCTGAGTGACAATTCCCTGTCCCGTATTCCTTCAGACATTGCCAAGCTTCACAATCTGGTGTAT
CTGGACCTGTCTTCTAATAAAATCCGGAGTTTACCGGCAGAACTCGGAAACATGGTATCACTCAGGGAACTCCATTTAAA
TAACAACCTGTTACGAGTTCTACCTTTTGAGCTGGGAAAACTGTTTCAGTTGCAGACTTTAGGCCTGAAAGGAAATCCAC
TTACCCAAGATATATTGAACCTCTATTTGGAACCAGATGGAACAAGAAGGCTACTGAACTATTTGCTTGATAATTTGGCA
GGTACTGCAAAAAGAATTTCAACAGAACAACCACCTCCAAGATCTTGGATTATGTTACAAGAACCAGACAGAACAAGGCC
TACTGCCTTGTTTTCTGTCATGTGCTACAATGTTCTTTGTGATAAATACGCGACCCGGCAGTTATACGGCTACTGTCCAT
CATGGGCGCTAAACTGGGACTACAGGAAAAAGGCCATTATTCAAGAAATCTTGAGCTGCAATGCTGATATCGTAAGTCTT
CAGGAGGTTGAAACAGAACAGTATTACAGTTTTTTTCTGGTAGAACTGAAAGAACGTGGCTATAATGGATTCTTTAGTCC
TAAATCTAGAGCTAGGACAATGTCAGAACAAGAAAGAAAACATGTTGATGGCTGTGCAATATTCTTCAAGACAGAAAAAT
TTACTTTGGTTCAGAAACACACTGTTGAATTTAATCAGCTAGCGATGGCAAATTCAGAAGGGTCTGAAGCTATGCTGAAC
AGAGTCATGACAAAAGATAACATTGGAGTTGCAGTACTGCTAGAACTTCGAAAGGAATTGATTGAAATGTCATCTGGAAA
ACCACATCTCGGAACAGAAAAACAACTGATTCTTGTGGCTAATGCTCATATGCATTGGGACCCTGAATACTCTGATGTGA
AGTTGGTTCAGACAATGATGTTCCTCTCAGAAGTGAAGAACATTATTGACAAAGCCTCACGGAGCCTCCAGTCCAGTGTG
TTGGGAGAGTTTGGAGCTATTCCACTGGTGTTGTGTGCAGATCTTAATTCTTTGCCAGACTCTGGTGTTGTAGAATATTT
GAGCACTGGTGGAGTAGAAACAAACCATAAAGACTTTAAGGAGCTGAGATATAATGAAAGTCTTACAAACTTCAGCTGCA
ATGGGAAAAATGGGACGACCAATGGCAGGATCACGCATGGGTTCAAGTTAAAGAGTGCCTACGAGAGTGGCCTGATGCCC
TACACGAACTACACCTTCGATTTCAAGGGTATAATTGACTACATCTTTTACTCTAAACCTCAGCTGAACACTTTAGGCAT
CCTGGGACCTCTGGATCACCATTGGCTAGTTGAGAATAATATCAGCGGCTGCCCACACCCACTCATCCCCTCTGATCACT
TCTCACTTTTTGCACAACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTTAACGGCATTCACCTTCCCAGCAGGAGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 6 .40 RPM |
| SRP021940_embryo | 16 .16 RPM |
| SRP021940_cerebellum | 9 .04 RPM |
| SRP021940_testis | 4 .99 RPM |
| SRP021940_placental_villous | 8 .08 RPM |
| SRP021940_articular_cartilage | 6 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000013018 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000011083 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_962 | 94.28 | 99.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000019325 retrocopies