Parental gene: | CTHRC1, ENSECAG00000020399 |
| Aliases: | None |
| Description: | collagen triple helix repeat containing 1 [Source:HGNC Symbol;Acc:18831] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 9:48705128..48714086(+) |
>ENSECAG00000020399
ATGCGCCCCCAGGGCCCCGCCGCCGCCTGCTCGCAGCGGCTCCTCGGTCTGCTGCTGCTCCTGCTGCTGCAGCTGCGGAC
GCCGTCGAGCGCCTCCGAGACCCCCAAGGGGAAGCAAAAGGCGCTGCTCCGGCAGAGGGAGGTGGTGGACCTGTATAATG
GAATGTGCTTACAAGGGCCTGCAGGGGTGCCAGGGCGAGATGGGAGCCCTGGGGCCAATGGCATTCCTGGTACCCCTGGG
ATCCCAGGTCGGGATGGATTCAAAGGAGAAAAGGGGGAATGCCTGAGGGAAACCTTCGAGGAGTCGTGGACACCTAACTA
CAAGCAGTGTTCGTGGAGTTCGCTGAATTATGGCATAGATCTTGGGAAAATTGCGGAGTGTACATTTACAAAGATGCGTT
CGAACAGTGCTCTGAGAGTTTTGTTCAGTGGCTCGCTTCGGTTAAAATGCAGAAACGCATGCTGTCAGCGTTGGTATTTC
ACGTTCAATGGAGCTGAATGTTCAGGACCTCTTCCCATTGAAGCTATAATTTATTTGGACCAAGGAAGCCCAGAACTGAA
TTCAACAATTAATATTCATCGCACTTCTTCTGTGGAAGGACTTTGTGAAGGAATTGGTGCCGGATTAGTGGATATTGCTA
TCTGGGTTGGTACTTGTTCCGACTACCCAAAAGGAGACGCCTCTACTGGATGGAATTCAGTGTCCCGAATCATTATCGAA
GAACTACCAAAATAA
ATGCGCCCCCAGGGCCCCGCCGCCGCCTGCTCGCAGCGGCTCCTCGGTCTGCTGCTGCTCCTGCTGCTGCAGCTGCGGAC
GCCGTCGAGCGCCTCCGAGACCCCCAAGGGGAAGCAAAAGGCGCTGCTCCGGCAGAGGGAGGTGGTGGACCTGTATAATG
GAATGTGCTTACAAGGGCCTGCAGGGGTGCCAGGGCGAGATGGGAGCCCTGGGGCCAATGGCATTCCTGGTACCCCTGGG
ATCCCAGGTCGGGATGGATTCAAAGGAGAAAAGGGGGAATGCCTGAGGGAAACCTTCGAGGAGTCGTGGACACCTAACTA
CAAGCAGTGTTCGTGGAGTTCGCTGAATTATGGCATAGATCTTGGGAAAATTGCGGAGTGTACATTTACAAAGATGCGTT
CGAACAGTGCTCTGAGAGTTTTGTTCAGTGGCTCGCTTCGGTTAAAATGCAGAAACGCATGCTGTCAGCGTTGGTATTTC
ACGTTCAATGGAGCTGAATGTTCAGGACCTCTTCCCATTGAAGCTATAATTTATTTGGACCAAGGAAGCCCAGAACTGAA
TTCAACAATTAATATTCATCGCACTTCTTCTGTGGAAGGACTTTGTGAAGGAATTGGTGCCGGATTAGTGGATATTGCTA
TCTGGGTTGGTACTTGTTCCGACTACCCAAAAGGAGACGCCTCTACTGGATGGAATTCAGTGTCCCGAATCATTATCGAA
GAACTACCAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 44 .39 RPM |
| SRP021940_embryo | 16 .42 RPM |
| SRP021940_cerebellum | 1 .09 RPM |
| SRP021940_testis | 1 .34 RPM |
| SRP021940_placental_villous | 19 .39 RPM |
| SRP021940_articular_cartilage | 0 .30 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_1114 | 51.59 | 63.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000020399 retrocopies