Parental gene: | PAPSS1, ENSECAG00000021678 |
| Aliases: | None |
| Description: | 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:8603] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 2:117631118..117706188(+) |
>ENSECAG00000021678
GGGATGCAGAGAGCGACTAATGTCACCTATCAAGCTCACCATGTCAGCAGGAACAAGAGGGGTCAGGTGGTGGGGACCAG
AGGTGGCTTTCGTGGCTGCACAGTTTGGCTCACAGGCTTGTCTGGAGCGGGGAAGACCACGGTGAGCATGGCCCTGGAGG
AGTACTTGGTTTGCCATGGGATCCCATGCTACACTTTGGATGGGGACAACATTCGTCAAGGTCTCAATAAGAATCTTGGC
TTTAGTCCTGAAGACAGAGAAGAGAATGTTCGCCGCATCGCAGAAGTTGCCAAACTGTTTGCAGACGCTGGCTTGGTGTG
CATCACAAGTTTTATATCGCCTTATACTCAGGATCGCAACAATGCAAGGCAAATTCATGAGGGTGCAAGTTTACCTTTTT
TTGAAGTATTTGTTGATGCTCCACTGCATGTTTGTGAACAGAGGGATGTCAAAGGACTCTACAAAAAAGCACGGGCTGGA
GAAATTAAAGGTTTCACTGGGATTGATTCCGAATATGAAAAACCGGAGGCCCCGGAGTTGGTGCTGAAAACAGACTCGTG
TGACGTGAATGACTGTGTCCAGCAAGTTGTGGAGCTTCTTCAGGAACGGGATATTGTACCTGTGGACGCCTCATACGAAG
TGAAAGAACTCTATGTGCCAGAAAATAAGCTTCATTTGGCAAAAACGGATGCGGAAACCTTACCGGCGTTGAAAATTAAT
AAAGTGGATATGCAGTGGGTGCAGGTTCTGGCAGAAGGTTGGGCGACCCCACTGAATGGCTTTATGCGAGAGAGGGAATA
CCTGCAGTGTCTCCATTTCGACTGTCTTCTGGATGGGGGTGTCATTAACTTGTCAGTGCCCATAGTTCTGACAGCTACTC
ACGAAGATAAAGAGAGGCTGGACGGCTGCACGGCATTCGCTCTGATGTACGAGGGCCGCCGTGTGGCTATTCTTCGCAAT
CCAGAGTTTTTTGAGCACAGGAAGGAGGAGCGCTGTGCCCGACAGTGGGGAACGACCTGCAAGAACCACCCCTACATCAA
GATGGTTATGGAACAAGGGGATTGGCTGATTGGAGGAGACCTTCAAGTCTTGGACCGAATTTACTGGAATGATGGTCTTG
ATCAGTATCGTTTCACTCCTACTGAGCTAAAGCAGAAGTTCAAAGATATGAATGCTGATGCTGTCTTTGCATTTCAGTTA
CGCAACCCGGTGCACAATGGGCATGCTCTGTTAATGCAGGATACCCATCAGCAGCTTCTGGAGAGGGGCTACCGGCGCCC
TGTCCTCCTCCTTCACCCTCTTGGTGGCTGGACAAAGGATGACGACGTTCCTTTAATGTGGCGTATGAAGCAGCACGCAG
CAGTGCTGGACGAGGGAGTCCTGAACCCTGCGACGACAGTGGTGGCCATCTTCCCATCTCCCATGATGTATGCTGGACCG
ACTGAGGTCCAGTGGCATTGCAGAGCACGGATGGTTGCCGGAGCCAATTTTTATATTGTTGGACGAGACCCTGCTGGCCT
GCCTCATCCGGAAACAGGGAAGGACCTCTACGAGCCGACTCATGGCGCCAAAGTGCTGACCATGGCCCCTGGCCTGATCA
CTTTGGAGATAGTCCCCTTTCGCGTGGCAGCTTACAACAAGAAGAAGAAGCAGATGGACTACTACGACTCTGAACACAAT
GAAGACTTTGAATTCATTTCAGGAACACGCATGCGCAAACTTGCCCGAGAAGGCCAGAAGCCTCCCGAAGGTTTCATGGC
TCCCAAGGCCTGGACTGTGCTGATGGAGTACTACAAATCCTTGGAGAAGGCTTAA
GGGATGCAGAGAGCGACTAATGTCACCTATCAAGCTCACCATGTCAGCAGGAACAAGAGGGGTCAGGTGGTGGGGACCAG
AGGTGGCTTTCGTGGCTGCACAGTTTGGCTCACAGGCTTGTCTGGAGCGGGGAAGACCACGGTGAGCATGGCCCTGGAGG
AGTACTTGGTTTGCCATGGGATCCCATGCTACACTTTGGATGGGGACAACATTCGTCAAGGTCTCAATAAGAATCTTGGC
TTTAGTCCTGAAGACAGAGAAGAGAATGTTCGCCGCATCGCAGAAGTTGCCAAACTGTTTGCAGACGCTGGCTTGGTGTG
CATCACAAGTTTTATATCGCCTTATACTCAGGATCGCAACAATGCAAGGCAAATTCATGAGGGTGCAAGTTTACCTTTTT
TTGAAGTATTTGTTGATGCTCCACTGCATGTTTGTGAACAGAGGGATGTCAAAGGACTCTACAAAAAAGCACGGGCTGGA
GAAATTAAAGGTTTCACTGGGATTGATTCCGAATATGAAAAACCGGAGGCCCCGGAGTTGGTGCTGAAAACAGACTCGTG
TGACGTGAATGACTGTGTCCAGCAAGTTGTGGAGCTTCTTCAGGAACGGGATATTGTACCTGTGGACGCCTCATACGAAG
TGAAAGAACTCTATGTGCCAGAAAATAAGCTTCATTTGGCAAAAACGGATGCGGAAACCTTACCGGCGTTGAAAATTAAT
AAAGTGGATATGCAGTGGGTGCAGGTTCTGGCAGAAGGTTGGGCGACCCCACTGAATGGCTTTATGCGAGAGAGGGAATA
CCTGCAGTGTCTCCATTTCGACTGTCTTCTGGATGGGGGTGTCATTAACTTGTCAGTGCCCATAGTTCTGACAGCTACTC
ACGAAGATAAAGAGAGGCTGGACGGCTGCACGGCATTCGCTCTGATGTACGAGGGCCGCCGTGTGGCTATTCTTCGCAAT
CCAGAGTTTTTTGAGCACAGGAAGGAGGAGCGCTGTGCCCGACAGTGGGGAACGACCTGCAAGAACCACCCCTACATCAA
GATGGTTATGGAACAAGGGGATTGGCTGATTGGAGGAGACCTTCAAGTCTTGGACCGAATTTACTGGAATGATGGTCTTG
ATCAGTATCGTTTCACTCCTACTGAGCTAAAGCAGAAGTTCAAAGATATGAATGCTGATGCTGTCTTTGCATTTCAGTTA
CGCAACCCGGTGCACAATGGGCATGCTCTGTTAATGCAGGATACCCATCAGCAGCTTCTGGAGAGGGGCTACCGGCGCCC
TGTCCTCCTCCTTCACCCTCTTGGTGGCTGGACAAAGGATGACGACGTTCCTTTAATGTGGCGTATGAAGCAGCACGCAG
CAGTGCTGGACGAGGGAGTCCTGAACCCTGCGACGACAGTGGTGGCCATCTTCCCATCTCCCATGATGTATGCTGGACCG
ACTGAGGTCCAGTGGCATTGCAGAGCACGGATGGTTGCCGGAGCCAATTTTTATATTGTTGGACGAGACCCTGCTGGCCT
GCCTCATCCGGAAACAGGGAAGGACCTCTACGAGCCGACTCATGGCGCCAAAGTGCTGACCATGGCCCCTGGCCTGATCA
CTTTGGAGATAGTCCCCTTTCGCGTGGCAGCTTACAACAAGAAGAAGAAGCAGATGGACTACTACGACTCTGAACACAAT
GAAGACTTTGAATTCATTTCAGGAACACGCATGCGCAAACTTGCCCGAGAAGGCCAGAAGCCTCCCGAAGGTTTCATGGC
TCCCAAGGCCTGGACTGTGCTGATGGAGTACTACAAATCCTTGGAGAAGGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 100 .69 RPM |
| SRP021940_embryo | 152 .16 RPM |
| SRP021940_cerebellum | 157 .77 RPM |
| SRP021940_testis | 33 .51 RPM |
| SRP021940_placental_villous | 92 .04 RPM |
| SRP021940_articular_cartilage | 177 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015905 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_862 | 73.10 | 90.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000021678 retrocopies