Parental gene: | SEPT7, ENSECAG00000022693 |
| Aliases: | None |
| Description: | septin 7 [Source:HGNC Symbol;Acc:1717] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 4:65449217..65532507(+) |
>ENSECAG00000022693
CAACAGAAGAACCTTGAAGGCTATGTGGGATTTGCAAATCTCCCAAATCAAGTGTACCGAAAATCAGTGAAGAGAGGGTT
TGAATTCACACTTATGGTTGTGGGTGAATCTGGACTGGGAAAGTCAACATTAATCAACTCATTATTCCTCACAGATTTGT
ATTCTCCAGAGTATCCAGGTCCTTCCCATAGAATAAAAAAGACTGTACAGGTGGAACAATCCAAAGTTTTAATCAAAGAA
GGTGGTGTTCAGTTGCTGCTCACAATAGTTGATACACCAGGATTTGGAGATGCAGTGGATAACAGTAATTGCTGGCAGCC
TGTTATCGACTACATTGATAGTAAATTTGAGGACTACCTAAATGCAGAATCTCGAGTGAACAGACGCCAGATGCCTGATA
ACAGGGTGCAGTGTTGTTTGTACTTCATTGCTCCTTCAGGACATGGACTTAAACCATTGGATATTGAGTTTATGAAGCGT
TTGCATGAAAAAGTGAATATCATCCCACTTATTGCCAAAGCAGACACACTCACACCGGAGGAATGCCAACAGTTTAAAAA
ACAGATAATGAAAGAAATCCAAGAACATAAAATTAAAATATATGAATTTCCAGAGACAGATGATGAAGAAGAAAATAAGC
TTGTTAAAAAGATAAAGGACCGTTTACCTCTTGCTGTGGTAGGTAGTAATACTATCATTGAAGTTAACGGCAAAAGGGTC
AGAGGAAGGCAGTATCCTTGGGGTGTTGCTGAAGTTGAAAATGGTGAACATTGTGATTTTACAATTCTAAGGAATATGTT
GATAAGAACACACATGCAGGACTTGAAAGATGTCACTAATAATGTACACTATGAGAACTACCGAAGCAGAAAACTGGCAG
CTGTGACTTACAATGGAGTAGATAATAACAAAAATAAAGGGCAGCTTACTAAGAGCCCTCTCGCCCAAATGGAAGAAGAA
AGAAGGGAGCATGTAGCTAAGATGAAGAAGATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAAGGTCAAAGAAAAAGT
TCAAAAACTGAAGGACTCTGAAGCTGAGCTCCAACGGCGCCATGAGCAGATGAAAAAGAATTTGGAAGCACAGCACAAAG
AATTAGAGGAAAAACGTCGTCAGTTTGAAGATGAAAAAGCAAACTGGGAAGCCCAGCAACGTATTTTAGAACAACAGAAT
TCTTCAAGAACCTTGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA
CAACAGAAGAACCTTGAAGGCTATGTGGGATTTGCAAATCTCCCAAATCAAGTGTACCGAAAATCAGTGAAGAGAGGGTT
TGAATTCACACTTATGGTTGTGGGTGAATCTGGACTGGGAAAGTCAACATTAATCAACTCATTATTCCTCACAGATTTGT
ATTCTCCAGAGTATCCAGGTCCTTCCCATAGAATAAAAAAGACTGTACAGGTGGAACAATCCAAAGTTTTAATCAAAGAA
GGTGGTGTTCAGTTGCTGCTCACAATAGTTGATACACCAGGATTTGGAGATGCAGTGGATAACAGTAATTGCTGGCAGCC
TGTTATCGACTACATTGATAGTAAATTTGAGGACTACCTAAATGCAGAATCTCGAGTGAACAGACGCCAGATGCCTGATA
ACAGGGTGCAGTGTTGTTTGTACTTCATTGCTCCTTCAGGACATGGACTTAAACCATTGGATATTGAGTTTATGAAGCGT
TTGCATGAAAAAGTGAATATCATCCCACTTATTGCCAAAGCAGACACACTCACACCGGAGGAATGCCAACAGTTTAAAAA
ACAGATAATGAAAGAAATCCAAGAACATAAAATTAAAATATATGAATTTCCAGAGACAGATGATGAAGAAGAAAATAAGC
TTGTTAAAAAGATAAAGGACCGTTTACCTCTTGCTGTGGTAGGTAGTAATACTATCATTGAAGTTAACGGCAAAAGGGTC
AGAGGAAGGCAGTATCCTTGGGGTGTTGCTGAAGTTGAAAATGGTGAACATTGTGATTTTACAATTCTAAGGAATATGTT
GATAAGAACACACATGCAGGACTTGAAAGATGTCACTAATAATGTACACTATGAGAACTACCGAAGCAGAAAACTGGCAG
CTGTGACTTACAATGGAGTAGATAATAACAAAAATAAAGGGCAGCTTACTAAGAGCCCTCTCGCCCAAATGGAAGAAGAA
AGAAGGGAGCATGTAGCTAAGATGAAGAAGATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAAGGTCAAAGAAAAAGT
TCAAAAACTGAAGGACTCTGAAGCTGAGCTCCAACGGCGCCATGAGCAGATGAAAAAGAATTTGGAAGCACAGCACAAAG
AATTAGAGGAAAAACGTCGTCAGTTTGAAGATGAAAAAGCAAACTGGGAAGCCCAGCAACGTATTTTAGAACAACAGAAT
TCTTCAAGAACCTTGGAAAAGAACAAGAAGAAAGGGAAGATCTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 41 .81 RPM |
| SRP021940_embryo | 110 .40 RPM |
| SRP021940_cerebellum | 23 .32 RPM |
| SRP021940_testis | 10 .23 RPM |
| SRP021940_placental_villous | 52 .68 RPM |
| SRP021940_articular_cartilage | 47 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012276 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000021167 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017639 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000003788 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016197 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_650 | 68.70 | 54.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000022693 retrocopies