Parental gene: | FBL, ENSECAG00000023221 |
| Aliases: | None |
| Description: | fibrillarin [Source:HGNC Symbol;Acc:3599] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 10:10454713..10459523(-) |
>ENSECAG00000023221
CCCACAGGTTTCAGCCCCCGTGGGGGTGGCTTCGGTGGCCGAGGGGGCTTTGGTGACCGCGGCGGTCGTGGCGGAGGCCG
AGGAGGCTTTGGCGGGGGCCGAGGTCGAGGCGGAGGCTTTAGGGGCCGTGGCCGAGGAGGAGGAGGAGGAGGTGGAAGAG
GTGGAGGGTTCCATCCTGGGGGCAACCGGGGTCGTGGCCGGGGAGGAAAAAGAGGAAACCAGTCGGGGAAGAATGTGGTG
GAACCTCATCGGCATGAGGGAGTCTTCATCTGTCGAGGAAAGGAGGATGCACTAGTCACCAAGAATCTGGTCCCTGGAGA
ATCAGTTTATGGAGAGAAGAGAGTCTCGATTTCGGAGGGAGATGACAAAATCGAGTACCGTGCCTGGAACCCCTTCCGCT
CCAAGCTGGCGGCAGCGATCCTGGGCGGCGTGGACCAGATCCACATCAAGCCAGGGGCCAAGGTGCTCTACCTCGGGGCT
GCCTCGGGCACCACAGTCTCGCACGTCTCTGACATCGTCGGCCCAGACGGTCTGGTCTACGCAGTTGAGTTCTCCCACCG
CTCCGGCCGTGACCTCATTAACTTGGCCAAGAAGAGGACCAACATCATTCCTGTCATTGAAGATGCTCGGCACCCGCACA
AATACCGCATGCTCATCGCGATGGTGGATGTGATCTTTGCCGACGTGGCCCAGCCAGACCAGACCCGGATCGTAGCCCTG
AATGCCCACACCTTCCTACGTAACGGCGGCCACTTCGTCATTTCCATTAAGGCCAACTGCATCGACTCCACCGCCTCGGC
CGAGGCCGTGTTTGCCTCGGAGGTGAAGAAGATGCAGCAGGAGAACATGAAGCCGCAGGAGCAGCTGACGCTGGAGCCCT
ACGAGAGAGACCACGCCGTGGTCGTGGGCGTGTACAGGCCACCCCCAAAGGTGAAGAACTGA
CCCACAGGTTTCAGCCCCCGTGGGGGTGGCTTCGGTGGCCGAGGGGGCTTTGGTGACCGCGGCGGTCGTGGCGGAGGCCG
AGGAGGCTTTGGCGGGGGCCGAGGTCGAGGCGGAGGCTTTAGGGGCCGTGGCCGAGGAGGAGGAGGAGGAGGTGGAAGAG
GTGGAGGGTTCCATCCTGGGGGCAACCGGGGTCGTGGCCGGGGAGGAAAAAGAGGAAACCAGTCGGGGAAGAATGTGGTG
GAACCTCATCGGCATGAGGGAGTCTTCATCTGTCGAGGAAAGGAGGATGCACTAGTCACCAAGAATCTGGTCCCTGGAGA
ATCAGTTTATGGAGAGAAGAGAGTCTCGATTTCGGAGGGAGATGACAAAATCGAGTACCGTGCCTGGAACCCCTTCCGCT
CCAAGCTGGCGGCAGCGATCCTGGGCGGCGTGGACCAGATCCACATCAAGCCAGGGGCCAAGGTGCTCTACCTCGGGGCT
GCCTCGGGCACCACAGTCTCGCACGTCTCTGACATCGTCGGCCCAGACGGTCTGGTCTACGCAGTTGAGTTCTCCCACCG
CTCCGGCCGTGACCTCATTAACTTGGCCAAGAAGAGGACCAACATCATTCCTGTCATTGAAGATGCTCGGCACCCGCACA
AATACCGCATGCTCATCGCGATGGTGGATGTGATCTTTGCCGACGTGGCCCAGCCAGACCAGACCCGGATCGTAGCCCTG
AATGCCCACACCTTCCTACGTAACGGCGGCCACTTCGTCATTTCCATTAAGGCCAACTGCATCGACTCCACCGCCTCGGC
CGAGGCCGTGTTTGCCTCGGAGGTGAAGAAGATGCAGCAGGAGAACATGAAGCCGCAGGAGCAGCTGACGCTGGAGCCCT
ACGAGAGAGACCACGCCGTGGTCGTGGGCGTGTACAGGCCACCCCCAAAGGTGAAGAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 94 .79 RPM |
| SRP021940_embryo | 130 .93 RPM |
| SRP021940_cerebellum | 53 .18 RPM |
| SRP021940_testis | 98 .02 RPM |
| SRP021940_placental_villous | 55 .38 RPM |
| SRP021940_articular_cartilage | 88 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000000171 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014684 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019229 | possible_ortholog | 4 retrogenes | |
| Sorex araneus | ENSSARG00000008709 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012486 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003967 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_308 | 87.50 | 73.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000023221 retrocopies