Parental gene: | FADS1, ENSECAG00000023280 |
| Aliases: | None |
| Description: | fatty acid desaturase 1 [Source:HGNC Symbol;Acc:3574] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 12:21722549..21731721(-) |
>ENSECAG00000023280
GATCCTTTTGTGGCATTCCACATCAACAAGAGCCTTGTGAGGAAGTATATGAACTCTCTCCTGATTGGAGAACTGTCTCC
TGAGCAGCCCAGCTTTGAGCCCACTAAGAACAAAGAGCTGACCGATGAGTTCCGGGAACTACGGGCCACAGTGGAGCAGA
TGGGGCTCATGAAGCCCAACCACGTCTTCTTCCTGCTGTACCTACTGCACATCCTGCTGCTGGATGTGGCTGCCTGGCTC
ACTCTTTGGGTCTTTGGGACATCCTTCGTGCCCTTCCTCCTCTGTGCAGTGCTGCTCAGCACAGTTCAGGCCCAGGCTGG
CTGGCTGCAGCATGACTTTGGACACCTGTCCGTCTTCAGCACCTCTACGTGGAACCACCTGCTACATCATTTTGTGATTG
GCCAACTGAAGGGGGCCCCTGCCAGTTGGTGGAACCACCTGCACTTCCAGCATCACGCCAAGCCCAACTGCTTCCGCAAA
GACCCAGACATCAACATGCACCCCTTCTTCTTTGCCTTGGGGAAGATCCTCTCTGTGGAGCTTGGGAAACAGAAGAAGAA
GTACATGCCATACAACCACCAGCACAAATACTTCTTCCTGATTGGGCCCCCAGCCTTGCTGCCTCTCTATTTCCAGTGGT
ATATTTTCTATTTTGTTATCCAGCGGAAGAAGTGGGTGGACTTGGCCTGGATGGTCACCTTCTACGTTCGCATCGTCCTC
ACTTATGTGCCATTGTTGGGACTGAAAGGCTTCCTGGGCCTTTTCTTCATGGTCAGGTTCCTGGAAAGCAACTGGTTTGT
GTGGGTGACACAGATGAACCATATCCCCATGCACATTGATCATGACCAGAACAAGGACTGGTTCTCCACCCAGCTCCAGG
CAACATGCAATGTGCACAAGTCTGCCTTCAATGACTGGTTCAGTGGACATCTCAACTTCCAGATTGAGCACCATCTTTTC
CCCACGATGCCTCGACACAACTACCACAAAGTGGCTCCCCTGGTGCAGTCCCTGTGCGCCAAGCATGGCATCCAGTACCA
GTCCAAGCCCCTGCTCTCAGCCTTTGCCGACATCGTCTACTCACTGAAGGAGTCCGGGCAGCTCTGGCTAGATGCCTATC
TTCAGCAATAA
GATCCTTTTGTGGCATTCCACATCAACAAGAGCCTTGTGAGGAAGTATATGAACTCTCTCCTGATTGGAGAACTGTCTCC
TGAGCAGCCCAGCTTTGAGCCCACTAAGAACAAAGAGCTGACCGATGAGTTCCGGGAACTACGGGCCACAGTGGAGCAGA
TGGGGCTCATGAAGCCCAACCACGTCTTCTTCCTGCTGTACCTACTGCACATCCTGCTGCTGGATGTGGCTGCCTGGCTC
ACTCTTTGGGTCTTTGGGACATCCTTCGTGCCCTTCCTCCTCTGTGCAGTGCTGCTCAGCACAGTTCAGGCCCAGGCTGG
CTGGCTGCAGCATGACTTTGGACACCTGTCCGTCTTCAGCACCTCTACGTGGAACCACCTGCTACATCATTTTGTGATTG
GCCAACTGAAGGGGGCCCCTGCCAGTTGGTGGAACCACCTGCACTTCCAGCATCACGCCAAGCCCAACTGCTTCCGCAAA
GACCCAGACATCAACATGCACCCCTTCTTCTTTGCCTTGGGGAAGATCCTCTCTGTGGAGCTTGGGAAACAGAAGAAGAA
GTACATGCCATACAACCACCAGCACAAATACTTCTTCCTGATTGGGCCCCCAGCCTTGCTGCCTCTCTATTTCCAGTGGT
ATATTTTCTATTTTGTTATCCAGCGGAAGAAGTGGGTGGACTTGGCCTGGATGGTCACCTTCTACGTTCGCATCGTCCTC
ACTTATGTGCCATTGTTGGGACTGAAAGGCTTCCTGGGCCTTTTCTTCATGGTCAGGTTCCTGGAAAGCAACTGGTTTGT
GTGGGTGACACAGATGAACCATATCCCCATGCACATTGATCATGACCAGAACAAGGACTGGTTCTCCACCCAGCTCCAGG
CAACATGCAATGTGCACAAGTCTGCCTTCAATGACTGGTTCAGTGGACATCTCAACTTCCAGATTGAGCACCATCTTTTC
CCCACGATGCCTCGACACAACTACCACAAAGTGGCTCCCCTGGTGCAGTCCCTGTGCGCCAAGCATGGCATCCAGTACCA
GTCCAAGCCCCTGCTCTCAGCCTTTGCCGACATCGTCTACTCACTGAAGGAGTCCGGGCAGCTCTGGCTAGATGCCTATC
TTCAGCAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 36 .54 RPM |
| SRP021940_embryo | 208 .42 RPM |
| SRP021940_cerebellum | 56 .61 RPM |
| SRP021940_testis | 12 .15 RPM |
| SRP021940_placental_villous | 6 .78 RPM |
| SRP021940_articular_cartilage | 8 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016696 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_493 | 65.29 | 63.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000023280 retrocopies