Parental gene: | PPAT, ENSECAG00000023644 |
| Aliases: | None |
| Description: | amidophosphoribosyltransferase [Source:RefSeq peptide;Acc:NP_001098786] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 3:76335871..76367956(+) |
>ENSECAG00000023644
ATGGAGCTGGAGGAGTTGGGGATCCGAGAGGAATGTGGCGTGTTCGGGTGCATCGCCTCAGGAGAGTGGCCCACGCAGCT
AGATGTGCCGCATGTGATCACTCTGGGACTCGTGGGGCTACAACACCGGGGTCAGGAGAGTGCTGGTATTGTGACCAGTG
ATGGGAATTCAGTACCAACATTCAAAACACACAAGGGAATGGGTCTTGTAAATCACGTCTTTACTGAAGACAATTTGAAG
AAATTATATATTTCAAATCTTGGAATTGGACACACAAGGTATGCCACTACTGGAAACTGTGAATTAGAAAATTGTCAGCC
CTTTGTTGTTGAAACACTTCATGGGAAGATAGCTGTGGCACATAATGGCGAATTGATAAATGCTGCTCACTTAAGGAGAA
AGCTTCTGCGCCATGGTATTGGTCTGTCAACAAGTTCTGATAGCGAAATGATTACCCAGTTACTGGCATATACCCCACCT
CAGGAACAAGATGACACCCCAGACTGGGTAGCAAGGATTAAAAACTTAATGAAGGAAGCGCCTACAGCATACTCCCTGCT
TATAATGCACAGAGATGTTATTTATGCAGTACGAGATCCTTATGGAAATCGTCCTCTATGCATTGGTCGTCTTATTCCTA
TATCTGATATAAATGATAAAGAGAAAAAGTCTTCAGAAACCGAAGGATGGGTGGTATCTTCAGAATCTTGTAGCTTTTTA
TCTATTGGTGCAAGATATTACCGTGAAGTCTTGCCTGGAGAAATTGTGGAAATATCCAGACATAATGTCCAAACTCTTGA
TATTATACCAAGATCTGAAGGAAACCCAATGGCTTTTTGTATTTTTGAATATGTTTATTTTGCAAGACCAGATAGTATAT
TTGAAAACCAAATGGTTTATACAGTAAGATACCGTTGTGGTCAGCAGCTGGCAATTGAAGCACCTGTGGATGCAGATTTG
GTTAGCACCGTTCCGGAATCTGCTACACCCGCTGCTCTTGGTTATGCAGGAAAGTGTGGGCTTCCCTATGTGGAGGTGCT
GTGTAAAAACCGGTATGTAGGAAGAACCTTCATTCAGCCAAACATGAGGTTAAGACAACTTGGTGTTGCAAAAAAATTTG
GAGTATTGTCAGACAACTTCAAAGACAAAAGAATTGTTCTTGTAGATGATTCAATTGTGAGAGGCAATACGATCTCACCC
ATAATCAAATTGCTCAAAGAATCTGGTGCAAAAGAGGTACACATTCGAGTAGCTTCACCGCCAATTAGGTATCCGTGCTT
CATGGGAATAAACATACCAACAAAAGAAGAGCTTATTGCCAATAAACCAGAATTTGAGCATCTTGCAGAATATCTAGGAG
CAAACAGTGTTGTGTATCTGTCAGTAGAAGGACTGGTTTCATCTGTACGAGAAGGGATAAAACTTAAAAAAAAGAAAGAG
AAAAAGCAAGATATTATAATTCAAGAAAATGGGAACGAAAATGGGAATGGTCTGGAATGTTTTGAAAAGAACGGTCATTG
TACAGCTTGTCTCACTGGGAAATACCCTGTGGAAATGGAATGGTAG
ATGGAGCTGGAGGAGTTGGGGATCCGAGAGGAATGTGGCGTGTTCGGGTGCATCGCCTCAGGAGAGTGGCCCACGCAGCT
AGATGTGCCGCATGTGATCACTCTGGGACTCGTGGGGCTACAACACCGGGGTCAGGAGAGTGCTGGTATTGTGACCAGTG
ATGGGAATTCAGTACCAACATTCAAAACACACAAGGGAATGGGTCTTGTAAATCACGTCTTTACTGAAGACAATTTGAAG
AAATTATATATTTCAAATCTTGGAATTGGACACACAAGGTATGCCACTACTGGAAACTGTGAATTAGAAAATTGTCAGCC
CTTTGTTGTTGAAACACTTCATGGGAAGATAGCTGTGGCACATAATGGCGAATTGATAAATGCTGCTCACTTAAGGAGAA
AGCTTCTGCGCCATGGTATTGGTCTGTCAACAAGTTCTGATAGCGAAATGATTACCCAGTTACTGGCATATACCCCACCT
CAGGAACAAGATGACACCCCAGACTGGGTAGCAAGGATTAAAAACTTAATGAAGGAAGCGCCTACAGCATACTCCCTGCT
TATAATGCACAGAGATGTTATTTATGCAGTACGAGATCCTTATGGAAATCGTCCTCTATGCATTGGTCGTCTTATTCCTA
TATCTGATATAAATGATAAAGAGAAAAAGTCTTCAGAAACCGAAGGATGGGTGGTATCTTCAGAATCTTGTAGCTTTTTA
TCTATTGGTGCAAGATATTACCGTGAAGTCTTGCCTGGAGAAATTGTGGAAATATCCAGACATAATGTCCAAACTCTTGA
TATTATACCAAGATCTGAAGGAAACCCAATGGCTTTTTGTATTTTTGAATATGTTTATTTTGCAAGACCAGATAGTATAT
TTGAAAACCAAATGGTTTATACAGTAAGATACCGTTGTGGTCAGCAGCTGGCAATTGAAGCACCTGTGGATGCAGATTTG
GTTAGCACCGTTCCGGAATCTGCTACACCCGCTGCTCTTGGTTATGCAGGAAAGTGTGGGCTTCCCTATGTGGAGGTGCT
GTGTAAAAACCGGTATGTAGGAAGAACCTTCATTCAGCCAAACATGAGGTTAAGACAACTTGGTGTTGCAAAAAAATTTG
GAGTATTGTCAGACAACTTCAAAGACAAAAGAATTGTTCTTGTAGATGATTCAATTGTGAGAGGCAATACGATCTCACCC
ATAATCAAATTGCTCAAAGAATCTGGTGCAAAAGAGGTACACATTCGAGTAGCTTCACCGCCAATTAGGTATCCGTGCTT
CATGGGAATAAACATACCAACAAAAGAAGAGCTTATTGCCAATAAACCAGAATTTGAGCATCTTGCAGAATATCTAGGAG
CAAACAGTGTTGTGTATCTGTCAGTAGAAGGACTGGTTTCATCTGTACGAGAAGGGATAAAACTTAAAAAAAAGAAAGAG
AAAAAGCAAGATATTATAATTCAAGAAAATGGGAACGAAAATGGGAATGGTCTGGAATGTTTTGAAAAGAACGGTCATTG
TACAGCTTGTCTCACTGGGAAATACCCTGTGGAAATGGAATGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 5 .00 RPM |
| SRP021940_embryo | 16 .24 RPM |
| SRP021940_cerebellum | 7 .11 RPM |
| SRP021940_testis | 7 .55 RPM |
| SRP021940_placental_villous | 9 .19 RPM |
| SRP021940_articular_cartilage | 4 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000128059 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004608 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000020693 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008762 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029568 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016080 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010928 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_270 | 87.96 | 72.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_1113 | 58.36 | 50.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000023644 retrocopies