Parental gene: | ENSECAG00000023688 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 8:29820451..29946574(-) |
>ENSECAG00000023688
ATATCGTTTGAGGACGTGGCTGTGGACTTCACCTTGGAGGAGTGGCAGCTACTAAACCCTACTCAGAAGAACTTGTACAG
AGACGTGATGTTGGAGAACTATAGCAATCTAGCTTTCTTGGGTTATCAAATTATCAAACCTGATGCCGTTTTCCAGCTGG
AGCAAGAAGAGCAGTGGATAACAGATGAAGAGATCCTAAACCACAGCTGTCCAGAAGAAGTCTGGCTAGATGATAATCTC
AAAATGTGGCACCAGGATAATCAAGACAAAGGTATGGAGAGAGGCCATGAATATGATGTTTTTGGGAAAATATTTCATTC
CAGCATTAACTTTGTTCATTTAGGAATGAGGCCTCATAAATGTGACACAGGTGAAAAAAGTTTGAAACATCCTTTTGATT
TTCTTATTCCAAAAAATAACTGTGGAAGAAAGAAACTTGATGAGCTCAATAAGAAATCGTTAGTCTATATCAAACCTGAT
AGACCCCACAGTGGAATAAAATACCTCTGTCTATGCGTGGAATGTGGCAAAACTTTTAGCAAGAAGTCACAGCTCATTGT
GCATCAGAGAACTCACACGGGGGAGAAGCCCTACGGCTGCGGCCAGTGCGGGAAGGCCTTCTCCCAGAAGTCATTGCTCA
CTATTCACCAAAGGACTCATTCAGGAGAAAAACCATATGGGTGTGGTGAGTGTCAAAAAGCTTTCAGTAGGAAGTCACTG
CTCGTTTTACATCAGAGGACTCACACGGGAGAGAAGCCCTACAGCTGCCGCGAATGTGGGAAGGCCTTCAGCAGGAAGTC
CCAGCTTAAAAGACATCAGAGAACTCACACAGTAGAGAAGCCCTACGGCTGCAGTGACTGTGGGAAAGCCTTCTCTCAGA
AGCTAAAGCTCATCTCCCATCAGAGAATGCACACGGGAGAGAAACCCTATAAGTGTGGTGATTGTGGGAAAGCCTTCTTT
TGGAAGTCGCAGCTTATTACTCATCAGAGGACTCACACGGGGAAGAAACCCTATGCATGTAGTGAGTGTGAAAAAGCCTT
CAGCAGGAACTCGCTCCTCATTAGGCATCAGAGGATCCACACAGGAGAGAAGCCCTATGAGTGCAGGGAGTGTGGAGAAG
CCTTCATCAGAAAACCACAGCTCCTGATCAGACATCAGAAAACCCATCTGGGAGAGAAACCCTATGGATGTGTTGAGTGT
GGGAAAACTTTCTTTGGGAAGTCACAGCTCCTAACACATCAAAGAACTCACACTGGAGAGAAGCCTTATGAATGCAGTGA
GTGTGGGAAGGCCTTCACGCAGCGGTCAAGCCTGATGTCCCATCAGAGGACACACACAGGGGAGAAGCCCTATGAGTGCA
GTGAGTGTGGAAAAGCCTTCAGCGAGAAGTCAAGCCTCATCCACCATCAGAGAACCCACACTGGAGAAAAACCCTTTGAG
TGTGGTGAATGTAGGAAAGCTTTTGCCTGGAAGCCACAACTTCTGAGGCATCAGAGAATTCATACAGGGGAGAAGCCCTA
TGAATGCAGTGAATGCGGGAAAGCATTTGTTCAGAAAGTGCAGCTCATTAAGCATCAGAGAAATCATACAGGAGAGAAAA
CCTATGGATGCAGTGATTGTGCCAAAGCTTTCTTTGAGAAGGCACAGCTCATTATACATCAGAGGATTCATACAGGAGAG
AGACCCTATGAATGTGGTGAGTGTGGGAAGTCTTTCACTAGGAAGTCCCACCTCATGCGGCATCAGAGAATTCACACAGG
AGATAAATACTATGGGTGCACTGAGTGTGGGACTGCCTTCAGCAGGAAGAAGTCACGATTCGTTGTACATCAGAGAACAC
GTACAGGAGAGAAACCCTTTAAATGCAGTGAACGTGGCAAAGGCTTTTCCCAGAAGTCACACCTTGTTACACATCACACA
GTTCACACAGGAGAAAAGCTTTATGGATGTGAATGTGGGAAGGCTTTCTCTCGAAAGTCACATCTCATTACACATAAGAG
AACTCATACAGGAGAGAAACCCTATGAATGCAGTGACTGTAACAAAGTCTTCTCTCAGACATCACAGCTCATTATTCATC
AGCGAAGTCATACAGGAGAGAAACCGTATGGCTGTGGTGAATGTGGGAGAGCCTTTAGTGGGAAGTCACAGCTTATTACT
CATAAGAGAACCCACATAGATGAAAAACCCAATAAGTGCAGTGAATGTGGGAAAGCCTTCAGAGAGAAATCAAGTCTCAA
TAAGCATCAGAGGATTCATGCAGGAGAGAAACCATATGGATGCAGTGAATGTGGGAAAGCTTTCAGTGGAAAGCCACTCC
TCATTAGACATCAGAAAACTCATTCAGGAGAAAAACCCTATGGATGTAATGACTGTACAAAAGCATTTATTTGGAAGTCA
CAGCTCATTATACATCAGAGAACTCACACAGGAGAGAAGCCCCATGGCTGCAGCGAATGTGGGAAGGCCTTCTCCCAGAA
GTCATACCTCATGATACATCAGAGAACTCACACAGAACAGAAACCCTAG
ATATCGTTTGAGGACGTGGCTGTGGACTTCACCTTGGAGGAGTGGCAGCTACTAAACCCTACTCAGAAGAACTTGTACAG
AGACGTGATGTTGGAGAACTATAGCAATCTAGCTTTCTTGGGTTATCAAATTATCAAACCTGATGCCGTTTTCCAGCTGG
AGCAAGAAGAGCAGTGGATAACAGATGAAGAGATCCTAAACCACAGCTGTCCAGAAGAAGTCTGGCTAGATGATAATCTC
AAAATGTGGCACCAGGATAATCAAGACAAAGGTATGGAGAGAGGCCATGAATATGATGTTTTTGGGAAAATATTTCATTC
CAGCATTAACTTTGTTCATTTAGGAATGAGGCCTCATAAATGTGACACAGGTGAAAAAAGTTTGAAACATCCTTTTGATT
TTCTTATTCCAAAAAATAACTGTGGAAGAAAGAAACTTGATGAGCTCAATAAGAAATCGTTAGTCTATATCAAACCTGAT
AGACCCCACAGTGGAATAAAATACCTCTGTCTATGCGTGGAATGTGGCAAAACTTTTAGCAAGAAGTCACAGCTCATTGT
GCATCAGAGAACTCACACGGGGGAGAAGCCCTACGGCTGCGGCCAGTGCGGGAAGGCCTTCTCCCAGAAGTCATTGCTCA
CTATTCACCAAAGGACTCATTCAGGAGAAAAACCATATGGGTGTGGTGAGTGTCAAAAAGCTTTCAGTAGGAAGTCACTG
CTCGTTTTACATCAGAGGACTCACACGGGAGAGAAGCCCTACAGCTGCCGCGAATGTGGGAAGGCCTTCAGCAGGAAGTC
CCAGCTTAAAAGACATCAGAGAACTCACACAGTAGAGAAGCCCTACGGCTGCAGTGACTGTGGGAAAGCCTTCTCTCAGA
AGCTAAAGCTCATCTCCCATCAGAGAATGCACACGGGAGAGAAACCCTATAAGTGTGGTGATTGTGGGAAAGCCTTCTTT
TGGAAGTCGCAGCTTATTACTCATCAGAGGACTCACACGGGGAAGAAACCCTATGCATGTAGTGAGTGTGAAAAAGCCTT
CAGCAGGAACTCGCTCCTCATTAGGCATCAGAGGATCCACACAGGAGAGAAGCCCTATGAGTGCAGGGAGTGTGGAGAAG
CCTTCATCAGAAAACCACAGCTCCTGATCAGACATCAGAAAACCCATCTGGGAGAGAAACCCTATGGATGTGTTGAGTGT
GGGAAAACTTTCTTTGGGAAGTCACAGCTCCTAACACATCAAAGAACTCACACTGGAGAGAAGCCTTATGAATGCAGTGA
GTGTGGGAAGGCCTTCACGCAGCGGTCAAGCCTGATGTCCCATCAGAGGACACACACAGGGGAGAAGCCCTATGAGTGCA
GTGAGTGTGGAAAAGCCTTCAGCGAGAAGTCAAGCCTCATCCACCATCAGAGAACCCACACTGGAGAAAAACCCTTTGAG
TGTGGTGAATGTAGGAAAGCTTTTGCCTGGAAGCCACAACTTCTGAGGCATCAGAGAATTCATACAGGGGAGAAGCCCTA
TGAATGCAGTGAATGCGGGAAAGCATTTGTTCAGAAAGTGCAGCTCATTAAGCATCAGAGAAATCATACAGGAGAGAAAA
CCTATGGATGCAGTGATTGTGCCAAAGCTTTCTTTGAGAAGGCACAGCTCATTATACATCAGAGGATTCATACAGGAGAG
AGACCCTATGAATGTGGTGAGTGTGGGAAGTCTTTCACTAGGAAGTCCCACCTCATGCGGCATCAGAGAATTCACACAGG
AGATAAATACTATGGGTGCACTGAGTGTGGGACTGCCTTCAGCAGGAAGAAGTCACGATTCGTTGTACATCAGAGAACAC
GTACAGGAGAGAAACCCTTTAAATGCAGTGAACGTGGCAAAGGCTTTTCCCAGAAGTCACACCTTGTTACACATCACACA
GTTCACACAGGAGAAAAGCTTTATGGATGTGAATGTGGGAAGGCTTTCTCTCGAAAGTCACATCTCATTACACATAAGAG
AACTCATACAGGAGAGAAACCCTATGAATGCAGTGACTGTAACAAAGTCTTCTCTCAGACATCACAGCTCATTATTCATC
AGCGAAGTCATACAGGAGAGAAACCGTATGGCTGTGGTGAATGTGGGAGAGCCTTTAGTGGGAAGTCACAGCTTATTACT
CATAAGAGAACCCACATAGATGAAAAACCCAATAAGTGCAGTGAATGTGGGAAAGCCTTCAGAGAGAAATCAAGTCTCAA
TAAGCATCAGAGGATTCATGCAGGAGAGAAACCATATGGATGCAGTGAATGTGGGAAAGCTTTCAGTGGAAAGCCACTCC
TCATTAGACATCAGAAAACTCATTCAGGAGAAAAACCCTATGGATGTAATGACTGTACAAAAGCATTTATTTGGAAGTCA
CAGCTCATTATACATCAGAGAACTCACACAGGAGAGAAGCCCCATGGCTGCAGCGAATGTGGGAAGGCCTTCTCCCAGAA
GTCATACCTCATGATACATCAGAGAACTCACACAGAACAGAAACCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 4 .39 RPM |
| SRP021940_embryo | 16 .03 RPM |
| SRP021940_cerebellum | 7 .84 RPM |
| SRP021940_testis | 1 .60 RPM |
| SRP021940_placental_villous | 2 .21 RPM |
| SRP021940_articular_cartilage | 3 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000010608 | other_paralog | 1 retrogene | |
| Equus caballus | ENSECAG00000021667 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_75 | 59.82 | 65.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000023688 retrocopies