Parental gene: | CDCP1, ENSECAG00000025146 |
| Aliases: | None |
| Description: | CUB domain containing protein 1 [Source:HGNC Symbol;Acc:24357] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 16:41406567..41459966(+) |
>ENSECAG00000025146
ATGGCCGGCCTGAACTGCGGGATCACAATCGCCCTGCTGGGGGTCCTGCTGCTGAACGGTGCGCTCCCGCCGCTAGGAGT
GGAAGCTTCTGAGATTGCTGTGCCACATGGAAGCGGCATTACAGTTCTCATAAAGCCCGGGACCCCAACTCTGCCAGCGA
AGGCCTGTTACATCGTCGTTTTTAAAAAGCATGTAACCACGTTGTCCATCAAATCCGGAGAGAGAACAGTCTTTTCCTTT
AGCTGCCAGGATCCAGAGAATCACTTTGTTGTGGAGATCCAGAAGAATATTGACTGCATGTCAGGCCCGTGTCCTTTTGG
GGAGGTTCAGCTTCAGCCCTCACCGTCGGTGCTGCCCGCTCTCAATAGAACTTTCATCTGGGACGTCAAAGCTCACAAGA
GCATCGGTCTGGAGCTACAGTTCTCCAAGCCTCGCCTGAGGCAGATCGAGCCGGGGGAGAGCTGTCCAGATGGCGTCACT
CACTCCATCAGCGGCCGCATCGATACCACCATGGTCAGGATCGGAACCTTCTGCAGCAATGGCACTGTGTCCCGGATCAA
GATGCAAGAGGGAGTGAAGATGGCCTTACACCTGCCGTGGTTCCACGACAGAAACATCTCCGGCTTCAGCATCGCAAACC
GGTCGTCTATAAAACGACTGTGCATCATCGAATCTGTGTTTGAGGGTGAGGGCTCAGCAACCCTGATGTCTGCCAACTAC
CCCGATGGCTTCCCTGAGGACGAGCTCATGACGTGGCAGTTTGTCATTCCCGGGCACCTGCGGGCGAGCGTCTCCTTCCT
CAACTTCAACAACTCCAACTGCGAGAAGAAGGAGGAGCGAGTTGAGTACTACATCCCAGGCTCCACCACCAACCCCGAGG
TGTTCAAGCTGGAGGACAAGCAACCTGGGAACATGGCCGGGAACTTCAACCTCTCTCTGCAGGGCTGCGACCAAGATGCC
CAAAGTCCAGGGATCTTCCGGCTGCAGTTTCAAGTTTTGGTCCAACATCCACAAAACGAAAGCAATAAAACCTACGTGGT
CGACTTGAGTGATGAGCGAGCCATGTCGCTCACCATCGAGCCGAAGCCCATCAGACTTAGCCGAAAGTTTGTCCCCGCCT
GCTACGTGTGTCTGGAGACTTGGTTCTGCAACACCACCCTCACCCTGACGTCTGGCTCCAAACACAAGATCTCGTTCCTG
TGTAATGATCTGACACGGCTGCAGATGAACGCCGAGAAAACCATAAGCTGCACGGACCGCCGGTACTGCCACAAGAAGTC
TTACCCACTCCAGGTGCCCAGCAACATCCTCCAGCTGCCTGTGCAGCTGCACAACTTCTCCTGGAAGCTGCTGGTGCCCA
AGGACAGTCTCAGCCTGGTACTGGTGCCGGTCCAGAAGCTGCAGCAGCACACATACGAGAGGGCCTGTAACACCAGCTTC
AGATACCTCGTGGCCAGTGCCGTCCCCAGCCAGGACCTTTACTTCGGCTCCTTCTGCTCCGGAGGCTCCATCGAGCAGAT
CCAGGTGAAGCAGAACATCTCGGTGACTCTCCGCACCTTTTCCCCCAGCTACCAACAGGATATCTCCAGGCAGGGCCTGA
CCGTGTCCTTTAGACCATACTTCACAGAGGAAGCTGTTTTCACGGTGACCCCAGACGTGAAAAGCAAGGTCTATCTGAGG
ACCCCTAACTGGGACCGGGGTCTGCCATCCCTCGCCTCGGTGTCCTGGAACATCAGCGTGCCCAGAGACCAGGTGGCCTG
CCTGACCTTCTTAAAGGAGCGGACCGGCCTGGTCTGCCAGACAGGGCGTGCGTTCATGATCATCCAGGAGCAGCGGATGC
GGGCTGAGGAGATCTTCAGCCTGGAGGAGGTGCTTCCCAAGCCAAGATTCCACCATCACAGTTTCTGGGTCAACATCTCC
AATTGCAGTCCTGTGAGCGGCAAGCAGCTGGACATGCTCTTCTGGGTGTTGCTTTCCCCGAGGACAACAGACATGACTGT
CATCATCATCGCAGTGGTGGGAGGTGGCGCCTTACTGATGTTTGCCCTCGGACTCATTATTTGCCTTGTGAAAAAGAAGA
AGAAAAAGGAGATAAACAAGGGCCCGGCTGTAGGTATCTACAATGGCAACGTCAATACCCAGATGCCGATGCAGTCAAAA
AAGTTTCAGAAGAGACGAAAGGACAATGACTCCCACGTGTATGCGGTCATCGATGACACTATGGTATATGGGCATCTGCT
GCAGGATTCCAACGGGTCCTTCGTCCAGCCAGAGGTGGACACCTACCGGCCCTTTCAGGGCCCCACGGGGGACTGCCCTC
CCTCCCCACCCCCCATAGGCTTCAGGGCCCCAACTGCAAAGTTGACCACAGATGAACCACCCCCTGACATCCCTCCTGAG
TCTGAGAGTGAACCGTACACCTTCTCCCACCCCAACAAAGAGAATGTAAGCAATGGGAACACAGACATTCCCTTGCTGGA
TGCCCACAAGCCAGCGGAGCCGGGGGAATAA
ATGGCCGGCCTGAACTGCGGGATCACAATCGCCCTGCTGGGGGTCCTGCTGCTGAACGGTGCGCTCCCGCCGCTAGGAGT
GGAAGCTTCTGAGATTGCTGTGCCACATGGAAGCGGCATTACAGTTCTCATAAAGCCCGGGACCCCAACTCTGCCAGCGA
AGGCCTGTTACATCGTCGTTTTTAAAAAGCATGTAACCACGTTGTCCATCAAATCCGGAGAGAGAACAGTCTTTTCCTTT
AGCTGCCAGGATCCAGAGAATCACTTTGTTGTGGAGATCCAGAAGAATATTGACTGCATGTCAGGCCCGTGTCCTTTTGG
GGAGGTTCAGCTTCAGCCCTCACCGTCGGTGCTGCCCGCTCTCAATAGAACTTTCATCTGGGACGTCAAAGCTCACAAGA
GCATCGGTCTGGAGCTACAGTTCTCCAAGCCTCGCCTGAGGCAGATCGAGCCGGGGGAGAGCTGTCCAGATGGCGTCACT
CACTCCATCAGCGGCCGCATCGATACCACCATGGTCAGGATCGGAACCTTCTGCAGCAATGGCACTGTGTCCCGGATCAA
GATGCAAGAGGGAGTGAAGATGGCCTTACACCTGCCGTGGTTCCACGACAGAAACATCTCCGGCTTCAGCATCGCAAACC
GGTCGTCTATAAAACGACTGTGCATCATCGAATCTGTGTTTGAGGGTGAGGGCTCAGCAACCCTGATGTCTGCCAACTAC
CCCGATGGCTTCCCTGAGGACGAGCTCATGACGTGGCAGTTTGTCATTCCCGGGCACCTGCGGGCGAGCGTCTCCTTCCT
CAACTTCAACAACTCCAACTGCGAGAAGAAGGAGGAGCGAGTTGAGTACTACATCCCAGGCTCCACCACCAACCCCGAGG
TGTTCAAGCTGGAGGACAAGCAACCTGGGAACATGGCCGGGAACTTCAACCTCTCTCTGCAGGGCTGCGACCAAGATGCC
CAAAGTCCAGGGATCTTCCGGCTGCAGTTTCAAGTTTTGGTCCAACATCCACAAAACGAAAGCAATAAAACCTACGTGGT
CGACTTGAGTGATGAGCGAGCCATGTCGCTCACCATCGAGCCGAAGCCCATCAGACTTAGCCGAAAGTTTGTCCCCGCCT
GCTACGTGTGTCTGGAGACTTGGTTCTGCAACACCACCCTCACCCTGACGTCTGGCTCCAAACACAAGATCTCGTTCCTG
TGTAATGATCTGACACGGCTGCAGATGAACGCCGAGAAAACCATAAGCTGCACGGACCGCCGGTACTGCCACAAGAAGTC
TTACCCACTCCAGGTGCCCAGCAACATCCTCCAGCTGCCTGTGCAGCTGCACAACTTCTCCTGGAAGCTGCTGGTGCCCA
AGGACAGTCTCAGCCTGGTACTGGTGCCGGTCCAGAAGCTGCAGCAGCACACATACGAGAGGGCCTGTAACACCAGCTTC
AGATACCTCGTGGCCAGTGCCGTCCCCAGCCAGGACCTTTACTTCGGCTCCTTCTGCTCCGGAGGCTCCATCGAGCAGAT
CCAGGTGAAGCAGAACATCTCGGTGACTCTCCGCACCTTTTCCCCCAGCTACCAACAGGATATCTCCAGGCAGGGCCTGA
CCGTGTCCTTTAGACCATACTTCACAGAGGAAGCTGTTTTCACGGTGACCCCAGACGTGAAAAGCAAGGTCTATCTGAGG
ACCCCTAACTGGGACCGGGGTCTGCCATCCCTCGCCTCGGTGTCCTGGAACATCAGCGTGCCCAGAGACCAGGTGGCCTG
CCTGACCTTCTTAAAGGAGCGGACCGGCCTGGTCTGCCAGACAGGGCGTGCGTTCATGATCATCCAGGAGCAGCGGATGC
GGGCTGAGGAGATCTTCAGCCTGGAGGAGGTGCTTCCCAAGCCAAGATTCCACCATCACAGTTTCTGGGTCAACATCTCC
AATTGCAGTCCTGTGAGCGGCAAGCAGCTGGACATGCTCTTCTGGGTGTTGCTTTCCCCGAGGACAACAGACATGACTGT
CATCATCATCGCAGTGGTGGGAGGTGGCGCCTTACTGATGTTTGCCCTCGGACTCATTATTTGCCTTGTGAAAAAGAAGA
AGAAAAAGGAGATAAACAAGGGCCCGGCTGTAGGTATCTACAATGGCAACGTCAATACCCAGATGCCGATGCAGTCAAAA
AAGTTTCAGAAGAGACGAAAGGACAATGACTCCCACGTGTATGCGGTCATCGATGACACTATGGTATATGGGCATCTGCT
GCAGGATTCCAACGGGTCCTTCGTCCAGCCAGAGGTGGACACCTACCGGCCCTTTCAGGGCCCCACGGGGGACTGCCCTC
CCTCCCCACCCCCCATAGGCTTCAGGGCCCCAACTGCAAAGTTGACCACAGATGAACCACCCCCTGACATCCCTCCTGAG
TCTGAGAGTGAACCGTACACCTTCTCCCACCCCAACAAAGAGAATGTAAGCAATGGGAACACAGACATTCCCTTGCTGGA
TGCCCACAAGCCAGCGGAGCCGGGGGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 1 .59 RPM |
| SRP021940_embryo | 3 .66 RPM |
| SRP021940_cerebellum | 1 .66 RPM |
| SRP021940_testis | 1 .21 RPM |
| SRP021940_placental_villous | 23 .57 RPM |
| SRP021940_articular_cartilage | 0 .41 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_807 | 86.67 | 50.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000025146 retrocopies