Parental gene:

IMPACT, ENSEEUG00000003962

Aliases:None
Description:impact RWD domain protein [Source:HGNC Symbol;Acc:20387]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_5400:47218..77012(+)


>ENSEEUG00000003962
ATGGCTGAGGGGGACACAGGCAGCGACCAGAGGCAGAATGAGGAAATTGAAGCAATGGCGGCTATATATGGTGAGGAATG
GTGTGTCATTGATGACTGTGCCAAAATATTTTGTATTAGAATTAGTGACGATATAGATGACCCCAAGTGGACGCTTTGCT
TGCAGGTAATGCTGCCTAATGAATACCCAGGTACAGCCCCACCCATTTATCAACTCAATGCCCCTTGGCTGAAAGGACAA
GAACGTGCAGATTTATCTAATAGCCTTGAGGAAATATATATACAGAATATAGGTGAAAGTATCCTTTACCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCGGACATAAAGAAAAAAACTGAAGAGGAAG
ATGTTGACTGTGAAGAGGATCTCATTTTAGCTTGTAAACCAGAAAATCCAGTGAAAGCATTAGATTTTGCTGTCAGTAAA
AATCCAACAGTAGAAATAGAAGAAATACCTCCAATTGATCATGGCGTTCCTATTACAGACCGAAGAAGCACTTTCCAGGC
ACATCTGGCTCCAGTAGTTTGTCCCCAACAGGTAAAAATGGTTCTTGCCAAATTGTATGAGAATAAGAAAATAGCTAGTG
CTACCCACAACATCTATGCATACAGAATATATTGTGAGGATAAACAGACATTCTTACAGGACTATGAAGATGATGGAGAA
ACAGCAGCTGGTGGACGTCTCCTCCATCTCATGGAGATTCTGAGTGTGAGGAATGTCCTGGTGGTAGTGTCGCGCTGGTA
TGGAGGGATTCTGCTAGGACCAGATCGCTTCAAACATATCAACAACTGTGCCAGAAACATACTAGTGGAGAAGAACTACT
TAAATTCACCC

Library Parental gene expression (RPM)
SRP017611_liver 6 .91 RPM
SRP017611_kidney 12 .38 RPM
SRP017611_brain 10 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013068 ortholog_one2many 1 retrogene
retro_chof_2523,
Homo sapiens ENSG00000154059 ortholog_one2one 1 retrogene
retro_hsap_3341,
Macaca mulatta ENSMMUG00000004664 ortholog_one2many 1 retrogene
retro_mmul_1041,
Nomascus leucogenys ENSNLEG00000006582 ortholog_one2one 1 retrogene
retro_nleu_1166,
Pongo abelii ENSPPYG00000009071 ortholog_one2one 1 retrogene
retro_pabe_2753,
Pan troglodytes ENSPTRG00000009927 ortholog_one2one 1 retrogene
retro_ptro_2141,
Sorex araneus ENSSARG00000002836 ortholog_one2one 1 retrogene
retro_sara_719,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_409 76.00 58.92
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Download FASTA sequences of all ENSEEUG00000003962 retrocopies