Parental gene: | S100PBP, ENSEEUG00000006053 |
| Aliases: | None |
| Description: | S100P binding protein [Source:HGNC Symbol;Acc:25768] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_5887:106673..155438(+) |
>ENSEEUG00000006053
ATGACGTGCTCACTAGTGCCCTCTGAACAGTCTTCTGGTACCTCTTTTTCACCTAAAGATAGTGCCCCATTTTCTGGGGG
TTCCTTGGATAAGGATGAATTGAATGATTCCTTGCTAGAGCTATCTGAAGGAGAAGAAGATGATGGATTATTCAGTTTTA
CAGAGGAAGAGGTTCAAGAGCTCTTGAAGGATGATGACCCATCAAATGAGAACACTTGTAGAGCAGGGCTTCTTAAAGAT
GACGATAGCCATGTCAAGAAGGAAGGAGAAGGGAGTCAAATTCAAAGTGATGTGCCCCAAGAGAAAGATTCATTGAGCAG
CTTAGGTCCAGTAGATGAGACCCCTGGCCTCTTCAAACTACCTCAACTAACTACATCACCTGGTCATGGACCATCTCCTA
CTAAACCACTAAACGGACATTTTACAGTAGAAAAGAATCTCAAGAAAATAACAGTTGTTGCACCATTTGATCCAACAGTT
TGCTGTGCTGTGCTTGATAAGGAAAAGTCTGACTCATCTAGAGATAATGAAAGTAAGATAACAGAAGATGGTCTTAGCCC
AAATGAGACCAACCTTTGCACTGAATCTGAAGGAACTGGCCCTAGTAACTCTGCCCAAAAGGGGTCTCATTTCCCTTTTC
TTCAAAGTAAGAAAACTGTCTCTGTAGTCTCTCAAACCTTGGACCACTCAGAAACTCCCCAAGAAGTCCAGTCATCATGG
AAAAATGGATCACATAAATCAAGTGAAATGAGTTCTCCAGTTATTTCCACTTCATCAGACAAACAGGGTGCTCTTGGCAA
GGATTCTGAGAAGCTAAAAATACAAGAGAGAAGACTAGGTAAAGTCATTCCTGTTCTACAAACCCAAACCACTCATGCTC
CTCAAGCAGATCTAGAAGCAGAGAAGCAAAGGTATCTCAGTAATGTCATTGCTCACTTAGAAGGCTCAGAGGATGTTAAC
CAAGGTACTTGGGGGGAGCTCTGTGCCTTAATGGATCAAGTTCTTCATACGCATACCCCAAAGTGGCAGCATCCTTCAGA
CCTTACCAAACGAAACTGTGCCCAGTTCCAGAATTCCCAGCAAAGATACAGTCTGACTCAGTGGGTTGATAGAAATGAAA
GCCACCATCGATTCCAATGGCTCCCATGCACTCCT
ATGACGTGCTCACTAGTGCCCTCTGAACAGTCTTCTGGTACCTCTTTTTCACCTAAAGATAGTGCCCCATTTTCTGGGGG
TTCCTTGGATAAGGATGAATTGAATGATTCCTTGCTAGAGCTATCTGAAGGAGAAGAAGATGATGGATTATTCAGTTTTA
CAGAGGAAGAGGTTCAAGAGCTCTTGAAGGATGATGACCCATCAAATGAGAACACTTGTAGAGCAGGGCTTCTTAAAGAT
GACGATAGCCATGTCAAGAAGGAAGGAGAAGGGAGTCAAATTCAAAGTGATGTGCCCCAAGAGAAAGATTCATTGAGCAG
CTTAGGTCCAGTAGATGAGACCCCTGGCCTCTTCAAACTACCTCAACTAACTACATCACCTGGTCATGGACCATCTCCTA
CTAAACCACTAAACGGACATTTTACAGTAGAAAAGAATCTCAAGAAAATAACAGTTGTTGCACCATTTGATCCAACAGTT
TGCTGTGCTGTGCTTGATAAGGAAAAGTCTGACTCATCTAGAGATAATGAAAGTAAGATAACAGAAGATGGTCTTAGCCC
AAATGAGACCAACCTTTGCACTGAATCTGAAGGAACTGGCCCTAGTAACTCTGCCCAAAAGGGGTCTCATTTCCCTTTTC
TTCAAAGTAAGAAAACTGTCTCTGTAGTCTCTCAAACCTTGGACCACTCAGAAACTCCCCAAGAAGTCCAGTCATCATGG
AAAAATGGATCACATAAATCAAGTGAAATGAGTTCTCCAGTTATTTCCACTTCATCAGACAAACAGGGTGCTCTTGGCAA
GGATTCTGAGAAGCTAAAAATACAAGAGAGAAGACTAGGTAAAGTCATTCCTGTTCTACAAACCCAAACCACTCATGCTC
CTCAAGCAGATCTAGAAGCAGAGAAGCAAAGGTATCTCAGTAATGTCATTGCTCACTTAGAAGGCTCAGAGGATGTTAAC
CAAGGTACTTGGGGGGAGCTCTGTGCCTTAATGGATCAAGTTCTTCATACGCATACCCCAAAGTGGCAGCATCCTTCAGA
CCTTACCAAACGAAACTGTGCCCAGTTCCAGAATTCCCAGCAAAGATACAGTCTGACTCAGTGGGTTGATAGAAATGAAA
GCCACCATCGATTCCAATGGCTCCCATGCACTCCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .77 RPM |
| SRP017611_kidney | 8 .81 RPM |
| SRP017611_brain | 12 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000000537 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000764 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017396 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000014993 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_439 | 92.52 | 54.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000006053 retrocopies