Parental gene: | CSGALNACT1, ENSEEUG00000007709 |
| Aliases: | None |
| Description: | chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:24290] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_1721:190839..261043(-) |
>ENSEEUG00000007709
GTGAGGATGATTCGCCGGGGACTGCTGTCGTGGGTCTCGAGGGTGGCAGTGCTGCTCGTTCTCCTTTGCTGTGTCATCTC
CGTCCTCTACTTGCTGGCCTGCACCCCAAAAGGCAACGAGGAGCAGCTGGGACTTCCCTGGGCCAATGGCCCCACAGGGA
AAGAAGGGTACCAGGCTGTCCTGCAGGAGTGGGAAGAGCAGCACCGCAACTATATCAGCAGCCTCAAGCGGCAGATCTCG
CAGCTCAAAGAGGAGCTGCAGGAGAGGAGCACGCAACTCAAGAATGCGCAGCAACAGGCCAGTGACCCTGCGGGCCTGGA
TCCAGGCCCCCCGGAGAAGACCCAGGCCGACCTGCTGGCCTTCTTGCACTCCCAGGTGGAGAGGGCGGAGGTGCATGCCG
GTGTCAAGCTGGCCACNGAGTATGCAGCCGTGCCTTGCGATGAGGGGGCCCTGCAGAAAGTGTACCAATTAGAGACTGGC
TTGGCTGGGCACCCCGAGGAAAAGCCAGTGAGGAAAGATAAGCGGGATGAACTGGTGGAAGCCATTGAATCTGCTCTGGA
GACCTTGAACAGCCCGGAGGAGAGCAGCCCCCATCACCGTCCTTACACCTCTTCGGATTTCATAGAAGGGATCTACCGAA
CGGAAAAGGATAAAGGCACTTTGTATGAGCTCACATTCAAAGGGGACCACAAGCATGAATTCAGAAGACTTATCTTGTTT
CGACCTTTTGGCCCCATCATGAAAGTGAAAAAAGAACGACTCAACATGGCCAATACACTTATCAACGTGATCGTGCCGCT
AGCAAAGAGAGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGAAGAAGGTGTTTTATCCAGTCCTTTTCAGTCAGTACAATCCCAGCATAATATATGGCCATCATGATACCGTC
CCTCCCTTAGAACAGCAGCTGGTCATAAAGAAGGAGACTGGGTTCTGGAGAGACTTTGGATTTGGAATGACTTGTCAGTA
TCGCTCAGACTTCATTAATATAGGTGGATTTGACCTAGACATCAAAGGCTGGGGAGGCGAGGACGTGCACCTCTACCGCA
AATACCTGCACAGCAACCTCATAGTGGTGCGGACCCCGGTGCGGGGCCTCTTCCACCTATGGCATGAGAAGCGCTGTGTG
GATGAGCTGACGCCCGAGCAGTACAGGATGTGCATGCAGTCCAAGGCCATGAACGAGGCCTCCCACGGGCAGCTGGGCAT
GTTGGTCTTTCGGCACGAGATAGAGGCCCACCTTCGCAAACAGAAACAGAAGACAAATAGCAAGAAGACATGA
GTGAGGATGATTCGCCGGGGACTGCTGTCGTGGGTCTCGAGGGTGGCAGTGCTGCTCGTTCTCCTTTGCTGTGTCATCTC
CGTCCTCTACTTGCTGGCCTGCACCCCAAAAGGCAACGAGGAGCAGCTGGGACTTCCCTGGGCCAATGGCCCCACAGGGA
AAGAAGGGTACCAGGCTGTCCTGCAGGAGTGGGAAGAGCAGCACCGCAACTATATCAGCAGCCTCAAGCGGCAGATCTCG
CAGCTCAAAGAGGAGCTGCAGGAGAGGAGCACGCAACTCAAGAATGCGCAGCAACAGGCCAGTGACCCTGCGGGCCTGGA
TCCAGGCCCCCCGGAGAAGACCCAGGCCGACCTGCTGGCCTTCTTGCACTCCCAGGTGGAGAGGGCGGAGGTGCATGCCG
GTGTCAAGCTGGCCACNGAGTATGCAGCCGTGCCTTGCGATGAGGGGGCCCTGCAGAAAGTGTACCAATTAGAGACTGGC
TTGGCTGGGCACCCCGAGGAAAAGCCAGTGAGGAAAGATAAGCGGGATGAACTGGTGGAAGCCATTGAATCTGCTCTGGA
GACCTTGAACAGCCCGGAGGAGAGCAGCCCCCATCACCGTCCTTACACCTCTTCGGATTTCATAGAAGGGATCTACCGAA
CGGAAAAGGATAAAGGCACTTTGTATGAGCTCACATTCAAAGGGGACCACAAGCATGAATTCAGAAGACTTATCTTGTTT
CGACCTTTTGGCCCCATCATGAAAGTGAAAAAAGAACGACTCAACATGGCCAATACACTTATCAACGTGATCGTGCCGCT
AGCAAAGAGAGTGGACAAGTTCCGGCAGTTCATGCAGAATTTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGAAGAAGGTGTTTTATCCAGTCCTTTTCAGTCAGTACAATCCCAGCATAATATATGGCCATCATGATACCGTC
CCTCCCTTAGAACAGCAGCTGGTCATAAAGAAGGAGACTGGGTTCTGGAGAGACTTTGGATTTGGAATGACTTGTCAGTA
TCGCTCAGACTTCATTAATATAGGTGGATTTGACCTAGACATCAAAGGCTGGGGAGGCGAGGACGTGCACCTCTACCGCA
AATACCTGCACAGCAACCTCATAGTGGTGCGGACCCCGGTGCGGGGCCTCTTCCACCTATGGCATGAGAAGCGCTGTGTG
GATGAGCTGACGCCCGAGCAGTACAGGATGTGCATGCAGTCCAAGGCCATGAACGAGGCCTCCCACGGGCAGCTGGGCAT
GTTGGTCTTTCGGCACGAGATAGAGGCCCACCTTCGCAAACAGAAACAGAAGACAAATAGCAAGAAGACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .64 RPM |
| SRP017611_kidney | 1 .69 RPM |
| SRP017611_brain | 10 .15 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_356 | 94.33 | 53.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000007709 retrocopies