Parental gene: | ENSEEUG00000008272 |
| Aliases: | None |
| Description: | None |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_6683:186339..235371(+) |
>ENSEEUG00000008272
ATGGCGGCCACCGAGGGGGTCGCGCAGGGGAGCGAGCCGGGTCAGTCGGAGCCACCACCTCCCCAGCCACACCCCCCACC
CGCTGTGCAACAGCAGGAAGAGGAGATGGCGGAGGCCAGAGAGGTGGTGGCGTCCCCTATGGACGATGGGTTTCTGAGCC
TGGACTCCCCCACCTACGTGCTGTACAGAGACAGGGCAGAATGGGCTGATATAGATCCAGTGCCACAGAATGATGGCCCC
AACCCAGTGGTCCAGATCATTTATAGTGAAAAATTTAGAGATGTTTATGATTATTTCCGGGCTGTTCTACAGCGTGATGA
AAGAAGTGAACGAGCTTTTAAACTAACCAGAGATGCTATTGAGTTAAATGCAGCCAATTATACAGTGTGGCATTTTCGGA
GAGTTCTTCTAAAGTCACTTCAAAAGGATCTATATGAAGAATTGAACTATATCACTGCAATAATTGAGGAACAGCCAAAA
AACTATCAAGTTTGGCATCATAGGCGAGTATTAGTTGAGTGGCTGAAAGATCCATCTCAGGAGCTTGAGTTTATCGCTGA
TATTCTTAATCAGGACGCAAAGAACTACCATGCCTGGCAGCATCGGCAGTGGGTTATTCAGGAATTTAAACTTTGGAATA
ATGAGCTTCATTATGTAGACCTACTTCTCAGAGAGGATGTGAGAAATAACTCTGTTTGGAACCAAAGATACTTTGTAATT
TCTAACACCACTGGCTACAATGATCCTGCTATATTGGAAAGAGAAGTCCAGTACACTCTGGAAAGGATCAAACTAGTACC
ACATAATGAAAGTGCATGGAACTATCTGAAAGGGATTTTACAAGACCTTGGTCTTTCCAAATATCCCAATTTGTTAAATC
AGTTACTTGACTTACAACCAAGTCACAGTTCCCCCTACCTAATTGCCTTTCTTGTGGATATCTATGAAGACATGCTAGAA
AACCAATGTGAGGACAAGGAGGACATTCTGAATAAAGCACTAGAGTTATGTGAAATCCTAGCTAAAGAAAAGGACACTAT
AAGAAAGGAATATTGGAGATACATTGGGAGATCTCTTCAGAGCAAACACAGCACAGAAAATGACCCAGCAACAAATGTAC
AGCAATAA
ATGGCGGCCACCGAGGGGGTCGCGCAGGGGAGCGAGCCGGGTCAGTCGGAGCCACCACCTCCCCAGCCACACCCCCCACC
CGCTGTGCAACAGCAGGAAGAGGAGATGGCGGAGGCCAGAGAGGTGGTGGCGTCCCCTATGGACGATGGGTTTCTGAGCC
TGGACTCCCCCACCTACGTGCTGTACAGAGACAGGGCAGAATGGGCTGATATAGATCCAGTGCCACAGAATGATGGCCCC
AACCCAGTGGTCCAGATCATTTATAGTGAAAAATTTAGAGATGTTTATGATTATTTCCGGGCTGTTCTACAGCGTGATGA
AAGAAGTGAACGAGCTTTTAAACTAACCAGAGATGCTATTGAGTTAAATGCAGCCAATTATACAGTGTGGCATTTTCGGA
GAGTTCTTCTAAAGTCACTTCAAAAGGATCTATATGAAGAATTGAACTATATCACTGCAATAATTGAGGAACAGCCAAAA
AACTATCAAGTTTGGCATCATAGGCGAGTATTAGTTGAGTGGCTGAAAGATCCATCTCAGGAGCTTGAGTTTATCGCTGA
TATTCTTAATCAGGACGCAAAGAACTACCATGCCTGGCAGCATCGGCAGTGGGTTATTCAGGAATTTAAACTTTGGAATA
ATGAGCTTCATTATGTAGACCTACTTCTCAGAGAGGATGTGAGAAATAACTCTGTTTGGAACCAAAGATACTTTGTAATT
TCTAACACCACTGGCTACAATGATCCTGCTATATTGGAAAGAGAAGTCCAGTACACTCTGGAAAGGATCAAACTAGTACC
ACATAATGAAAGTGCATGGAACTATCTGAAAGGGATTTTACAAGACCTTGGTCTTTCCAAATATCCCAATTTGTTAAATC
AGTTACTTGACTTACAACCAAGTCACAGTTCCCCCTACCTAATTGCCTTTCTTGTGGATATCTATGAAGACATGCTAGAA
AACCAATGTGAGGACAAGGAGGACATTCTGAATAAAGCACTAGAGTTATGTGAAATCCTAGCTAAAGAAAAGGACACTAT
AAGAAAGGAATATTGGAGATACATTGGGAGATCTCTTCAGAGCAAACACAGCACAGAAAATGACCCAGCAACAAATGTAC
AGCAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 36 .66 RPM |
| SRP017611_kidney | 63 .01 RPM |
| SRP017611_brain | 31 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000168522 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000000631 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010003 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012979 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000009660 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011626 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_532 | 80.27 | 96.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000008272 retrocopies