Parental gene: | NUP35, ENSEEUG00000008469 |
| Aliases: | None |
| Description: | nucleoporin 35kDa [Source:HGNC Symbol;Acc:29797] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_5964:5337..35662(+) |
>ENSEEUG00000008469
ATGGCCGCCTTCGCGGTGGAACCCCAGGCGCTGACGTTAGGATCTGAACCAATGATGCTAGGTTCACCCACATCTCCAAA
ACCAGGTGTTAATGCCCAGTTCTTACCTGGATTTTTAATGGGGGACTTGCCAGCTCCTGCGACTCCACAGCCACGATCAA
TTAGTGGCCCTGCAGTTGGAGTGATGGAAATGCGCTCACCTGTACTTGCAGGTGGCTCACCACCACAGCCAGTTGTCCCC
GCACATAAGGATAAAAGCGGAGCTCCACCAGTCAGAAGCATATATGACGACATTTCCAGCCCAGCACTCGGCTCAACACC
TTTAACTTCAAGAAGACAGCCAAACATTTCAGTAATGCAGAGCCCTCTTGTTGGAGTTATGACAACTACTCCTGGAACAG
GGCAAAGTATGTTTAGTCCAGCAAGCATCGGTCAGCCACGAAAGACAACATTGTCTCCTGCCCAGTTGGATCCTTTTTAT
ACTCAAGGAGATTCTCTGACTTCAGAAGATCATCTTGATGACACTTGGGTGACTGTGTTTGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCCAACACAGGGAATATGCATCGTT
ATCAGTCGAAACTGCAGGCCCGAAAAGCCTTAAGTAAAGATGGGAAGATTGGAGAGTCCATCATGATTGGTGTGAAACCG
TGTATAGATAAAAGTGTCATGGAAAACAGTGACAGGTGTGCCTTGTCGTCTCCATCTGTAGCCTTCACACCACCCATCAA
AACCTTAGGGACACCAGCCCAACCTGGAAGTACTCCTGGAATTTCCACCATGAGGCCTCTTGCCACAGCGTACAAAGCAT
CGACCAGTGACTATCAGGTTATTTCTGATAGACAGACACCAAAAAAAGATGACAGCATCGTGTCCAGAGCAATGGAGTAC
ATGTTTGGCTGGTAG
ATGGCCGCCTTCGCGGTGGAACCCCAGGCGCTGACGTTAGGATCTGAACCAATGATGCTAGGTTCACCCACATCTCCAAA
ACCAGGTGTTAATGCCCAGTTCTTACCTGGATTTTTAATGGGGGACTTGCCAGCTCCTGCGACTCCACAGCCACGATCAA
TTAGTGGCCCTGCAGTTGGAGTGATGGAAATGCGCTCACCTGTACTTGCAGGTGGCTCACCACCACAGCCAGTTGTCCCC
GCACATAAGGATAAAAGCGGAGCTCCACCAGTCAGAAGCATATATGACGACATTTCCAGCCCAGCACTCGGCTCAACACC
TTTAACTTCAAGAAGACAGCCAAACATTTCAGTAATGCAGAGCCCTCTTGTTGGAGTTATGACAACTACTCCTGGAACAG
GGCAAAGTATGTTTAGTCCAGCAAGCATCGGTCAGCCACGAAAGACAACATTGTCTCCTGCCCAGTTGGATCCTTTTTAT
ACTCAAGGAGATTCTCTGACTTCAGAAGATCATCTTGATGACACTTGGGTGACTGTGTTTGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCCAACACAGGGAATATGCATCGTT
ATCAGTCGAAACTGCAGGCCCGAAAAGCCTTAAGTAAAGATGGGAAGATTGGAGAGTCCATCATGATTGGTGTGAAACCG
TGTATAGATAAAAGTGTCATGGAAAACAGTGACAGGTGTGCCTTGTCGTCTCCATCTGTAGCCTTCACACCACCCATCAA
AACCTTAGGGACACCAGCCCAACCTGGAAGTACTCCTGGAATTTCCACCATGAGGCCTCTTGCCACAGCGTACAAAGCAT
CGACCAGTGACTATCAGGTTATTTCTGATAGACAGACACCAAAAAAAGATGACAGCATCGTGTCCAGAGCAATGGAGTAC
ATGTTTGGCTGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .05 RPM |
| SRP017611_kidney | 14 .25 RPM |
| SRP017611_brain | 9 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000163002 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009919 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004140 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006423 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012998 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012711 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000711 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_666 | 75.69 | 55.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000008469 retrocopies