Parental gene: | GPN1, ENSEEUG00000013421 |
| Aliases: | None |
| Description: | GPN-loop GTPase 1 [Source:HGNC Symbol;Acc:17030] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_2528:35550..68932(+) |
>ENSEEUG00000013421
ATGGCGGCGCCCACGGCTCCCGCTGTAGCGGCTGAGGAGCCGCAGGCTTCGGGAGGTCCCAGGCCCCCAGTGTGCCTGCT
GGTGTTGGGGATGGCGGGATCTGGGAAGACTACCTTTGTGCAGAGGCTTACGGGACACCTGCACAGTCAAGGCTCTCCAC
CTTATGTGATCAATCTGGACCCAGCGGTGCATGAAGTTCCCTTTCCCGCCAACATTGATATACGTGACACTGTGAAATAT
AAAGAAGTTATGAAACAATATGGACTTGGACCCAATGGTGGCATAGTGACCTCACTCAATCTCTTTGCTACCAGATTTGA
TCAGGTAATGAAATTTATTGAGAAGGCCCAGAACATGTCTAAATATGTCTTGATCGACACACCTGGGCAGATTGAGGTAT
TCACCTGGTCAGCTTCCGGGACAATCATCACTGAGGCCCTGGCATCCTCGTTCCCGACAGTTGTCATTTATGTAATGGAC
ACATCGAGAAGTACCAATCCGGTGACCTTCATGTCCAATATGCTTTATGCATGCAGCATCTTGTACAAAACCAAGCTGCC
TTTCATTGTGGTCATGAATAAAACTGATATCATTGATCACAGTTTTGCAGTGGAATGGATGCAGGATTTTGAGACTTTCC
AAGATGCTTTGAATCAAGAGACTACATACGTCAGCAACCTGACTCGTTCAATGAGCCTGGTGTTGGATGAGTTTTATAGC
TCACTTAGGGTGGTGGGTGTCTCTGCGGTCCTGGGAACTGGCTTAGATGAGCTCTTTGTGCAAGTTACCAGTGCTGCTGA
AGAATATGAAAGGGAATATCGTCCTGAATATGAACGTCTGAAGAAATCACTGNNNNNNNNNNNNNNNCAGCAGCAGAAAG
AGCAGCTGGAGCGCCTTCGGAAGGACATGGGCTCCATAGCCTTGGACCCAGGGGCTGCTAAAGACAGGTTGTCTCCCGTG
CTGGACCCTTCTGACCTGATCCTGACACGGGGAACCTTGGACGAAGAGGATGAAGAAGCAGACAGTGACACAGATGATAT
TGACCACAGAGTTACAGAGGAAAGTCACGAAGAGCCAGCGTTCCAGAATTTCATGCAGGAATCAGTGGCACAGTACTGGA
AGAGAAGCGCCAAGTAG
ATGGCGGCGCCCACGGCTCCCGCTGTAGCGGCTGAGGAGCCGCAGGCTTCGGGAGGTCCCAGGCCCCCAGTGTGCCTGCT
GGTGTTGGGGATGGCGGGATCTGGGAAGACTACCTTTGTGCAGAGGCTTACGGGACACCTGCACAGTCAAGGCTCTCCAC
CTTATGTGATCAATCTGGACCCAGCGGTGCATGAAGTTCCCTTTCCCGCCAACATTGATATACGTGACACTGTGAAATAT
AAAGAAGTTATGAAACAATATGGACTTGGACCCAATGGTGGCATAGTGACCTCACTCAATCTCTTTGCTACCAGATTTGA
TCAGGTAATGAAATTTATTGAGAAGGCCCAGAACATGTCTAAATATGTCTTGATCGACACACCTGGGCAGATTGAGGTAT
TCACCTGGTCAGCTTCCGGGACAATCATCACTGAGGCCCTGGCATCCTCGTTCCCGACAGTTGTCATTTATGTAATGGAC
ACATCGAGAAGTACCAATCCGGTGACCTTCATGTCCAATATGCTTTATGCATGCAGCATCTTGTACAAAACCAAGCTGCC
TTTCATTGTGGTCATGAATAAAACTGATATCATTGATCACAGTTTTGCAGTGGAATGGATGCAGGATTTTGAGACTTTCC
AAGATGCTTTGAATCAAGAGACTACATACGTCAGCAACCTGACTCGTTCAATGAGCCTGGTGTTGGATGAGTTTTATAGC
TCACTTAGGGTGGTGGGTGTCTCTGCGGTCCTGGGAACTGGCTTAGATGAGCTCTTTGTGCAAGTTACCAGTGCTGCTGA
AGAATATGAAAGGGAATATCGTCCTGAATATGAACGTCTGAAGAAATCACTGNNNNNNNNNNNNNNNCAGCAGCAGAAAG
AGCAGCTGGAGCGCCTTCGGAAGGACATGGGCTCCATAGCCTTGGACCCAGGGGCTGCTAAAGACAGGTTGTCTCCCGTG
CTGGACCCTTCTGACCTGATCCTGACACGGGGAACCTTGGACGAAGAGGATGAAGAAGCAGACAGTGACACAGATGATAT
TGACCACAGAGTTACAGAGGAAAGTCACGAAGAGCCAGCGTTCCAGAATTTCATGCAGGAATCAGTGGCACAGTACTGGA
AGAGAAGCGCCAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .61 RPM |
| SRP017611_kidney | 31 .32 RPM |
| SRP017611_brain | 29 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000014941 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006379 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000007425 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_146 | 90.48 | 99.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000013421 retrocopies