Parental gene: | THUMPD1, ENSFCAG00000015158 |
| Aliases: | None |
| Description: | THUMP domain containing 1 [Source:HGNC Symbol;Acc:23807] |
| Organism: | Cat (Felis catus) |
| Coordinates: | E3:26730615..26735229(+) |
>ENSFCAG00000015158
ATGGCGGCCCCCGTCCAGCAGCCTCCTCAGTCTAGCGGTGGAAAGCGCAAAGGGAAAGCTCAGTATGTGCAGGCCAAGCG
GGCGCGGCGCTGCGACGGCGGGGGGCCACGGCAGCTGGAACCCGGGCTACAGGGCATTCTCATTACCTGCAACATGAACG
AGCGCAAGTGCGTGGAGGAGGCCTACAGTCTGCTCAACGAATACGGCGACGACATGTACGGGCCGGAAAAGTTTACAGAC
AAAGATCAGCAGCCCTCTGGAAGTGAGGGAGAAGATGATGATATGGAGGCTGCCTTGAAGAAAGAAGTTGGTGACATTAA
AGCATCTACGGAGATGAAGCTAAGAAGATTCCAATCAGTGGAGAGTGGAGCAAATAACGTAGTCTTCATCAGGACACTTG
GGATAGAACCTGAGAAATTGGTACATCATATTCTTCAGGATATGTATAAAACCAAGAAGAAGAAGACTCGGGTTATTCTA
CGAATGTTACCTATTTCGGGCACATGCAAGGCTTTCTTAGAAGACATGAAAAAATATGCAGAAACATTTTTGGCACCCTG
GTTTAAAGCTCCAAACAAAGGGACATTTCAGATTGTATATAAATCTCGAAATAACAGCCACATGAATAGAGAAGAAGTTA
TCAAAGAATTGGCAGGAATAGTAGGCAGCCTCAATTCGGAAAATAAAGTGGATCTTACCAATCCACAGTACACAGTGGTA
GTAGAAATCATTAAAGCTGTCTGTTGCCTGAGTGTTGTGACAGATTACATGTTGTTCAGAAAGTATAATCTCCAGGAGGT
GGTTAAGAGTGCTAAGGACCCATCACAGCTTAACCCAAAGCAGCCAGCACAAGCAGGAAATGGGAAAGAAGCTAAATTGG
AATCTGGTGACAAATCAAATCAAAATGAGCCAGCAGAAGGAAAAAATAACCAGCAAGTGGTACCAGAAAATAATGAGGAG
CTGGGGCACACAAAACCAAGATCT
ATGGCGGCCCCCGTCCAGCAGCCTCCTCAGTCTAGCGGTGGAAAGCGCAAAGGGAAAGCTCAGTATGTGCAGGCCAAGCG
GGCGCGGCGCTGCGACGGCGGGGGGCCACGGCAGCTGGAACCCGGGCTACAGGGCATTCTCATTACCTGCAACATGAACG
AGCGCAAGTGCGTGGAGGAGGCCTACAGTCTGCTCAACGAATACGGCGACGACATGTACGGGCCGGAAAAGTTTACAGAC
AAAGATCAGCAGCCCTCTGGAAGTGAGGGAGAAGATGATGATATGGAGGCTGCCTTGAAGAAAGAAGTTGGTGACATTAA
AGCATCTACGGAGATGAAGCTAAGAAGATTCCAATCAGTGGAGAGTGGAGCAAATAACGTAGTCTTCATCAGGACACTTG
GGATAGAACCTGAGAAATTGGTACATCATATTCTTCAGGATATGTATAAAACCAAGAAGAAGAAGACTCGGGTTATTCTA
CGAATGTTACCTATTTCGGGCACATGCAAGGCTTTCTTAGAAGACATGAAAAAATATGCAGAAACATTTTTGGCACCCTG
GTTTAAAGCTCCAAACAAAGGGACATTTCAGATTGTATATAAATCTCGAAATAACAGCCACATGAATAGAGAAGAAGTTA
TCAAAGAATTGGCAGGAATAGTAGGCAGCCTCAATTCGGAAAATAAAGTGGATCTTACCAATCCACAGTACACAGTGGTA
GTAGAAATCATTAAAGCTGTCTGTTGCCTGAGTGTTGTGACAGATTACATGTTGTTCAGAAAGTATAATCTCCAGGAGGT
GGTTAAGAGTGCTAAGGACCCATCACAGCTTAACCCAAAGCAGCCAGCACAAGCAGGAAATGGGAAAGAAGCTAAATTGG
AATCTGGTGACAAATCAAATCAAAATGAGCCAGCAGAAGGAAAAAATAACCAGCAAGTGGTACCAGAAAATAATGAGGAG
CTGGGGCACACAAAACCAAGATCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .13 RPM |
| SRP017611_kidney | 4 .53 RPM |
| SRP017611_brain | 9 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009499 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000008919 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000066654 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005231 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004225 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006971 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012369 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007848 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_195 | 91.63 | 76.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000015158 retrocopies