Parental gene:

VIMP, ENSFCAG00000028822

Aliases:None
Description:VCP-interacting membrane protein [Source:HGNC Symbol;Acc:30396]
Organism:Cat (Felis catus)
Coordinates:B3:19408391..19420609(-)


>ENSFCAG00000028822
ATGGAGCGCGACGGCCAGCAGCTGTCCGCGCGGCCGGCCCTGGAGACAGAGGGATTGCGCTTCCTTCACGTCACGGTGGG
CTCCCTGCTAGCCACCTATGGCTGGTACATCGTCTTCAGCTGCATCCTTCTCTACGTGGTATTTCAGAAGCTTTCCACCC
GACTCAGGGCCCTGAGGCAGAGACAGCTGGACCGAGCTGCGGCTGCAGTGGAACCTGATGTTGTTGTTAAACGGCAAGAG
GCTTTAGCAGCTGCCCGTTTGAAAATGCAAGAAGAATTAAATGCACAAGTCGAAAAGCATAAGGAAAAACTGAGACAGCT
TGAAGAACAAAAAAGGAGACAGAAGATTGAAATGTGGGACAGCATGCAAGAAGGAAAAAGTTACAAAGGAAATGTAAGAA
AGCCCCCGGAAGAAGATAGTGCTGGGCCTTCTACTCCATCAGTCCTGCCGAAACGGAAGCCTGACAGAAAACCTCTCCGA
GGAGGTGGTTACAACCCTTTGTCTGGTGAAGGAGGTGGAGCCTGCTCCTGGAGACCCGGACGCAGAGGCCCGTCAGCTGG
TGGATGA

Library Parental gene expression (RPM)
SRP017611_liver 19 .51 RPM
SRP017611_kidney 38 .23 RPM
SRP017611_brain 20 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007115 ortholog_one2one 1 retrogene
retro_amel_177,
Bos taurus ENSBTAG00000000640 ortholog_one2one 1 retrogene
retro_btau_1044,
Dasypus novemcinctus ENSDNOG00000010694 ortholog_one2one 2 retrogenes
retro_dnov_207, retro_dnov_880,
Echinops telfairi ENSETEG00000011401 ortholog_one2one 1 retrogene
retro_etel_2096,
Pteropus vampyrus ENSPVAG00000012873 ortholog_one2one 1 retrogene
retro_pvam_1334,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1524 75.76 52.13
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Download FASTA sequences of all ENSFCAG00000028822 retrocopies