Parental gene: | THAP3, ENSG00000041988 |
| Aliases: | None |
| Description: | THAP domain containing, apoptosis associated protein 3 [Source:HGNC Symbol;Acc:20855] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:6684925..6695646(+) |
>ENSG00000041988
ATGCCGAAGTCGTGCGCGGCCCGGCAGTGCTGCAACCGCTACAGCAGCCGCAGGAAGCAGCTCACCTTCCACCGGTTTCC
GTTCAGCCGCCCGGAGCTGCTGAAGGAATGGGTGCTGAACATCGGCCGGGGCAACTTCAAGCCCAAGCAGCACACGGTCA
TCTGCTCCGAGCACTTCCGGCCAGAGTGCTTCAGCGCCTTTGGAAACCGCAAGAACCTAAAGCACAATGCCGTGCCCACG
GTGTTCGCCTTTCAGGACCCCACACAGCAGGTGAGGGAGAACACAGACCCTGCCAGTGAGAGAGGAAATGCCAGCTCTTC
TCAGAAAGAAAAGGTCCTCCCTGAGGCGGGGGCCGGAGAGGACAGTCCTGGGAGAAACATGGACACTGCACTTGAAGAGC
TTCAGTTGCCCCCAAATGCCGAAGGCCACGTAAAACAGGTCTCGCCACGGAGGCCGCAAGCAACAGAGGCTGTTGGCCGG
CCGACTGGCCCTGCAGGCCTGAGAAGGACCCCCAACAAGCAGCCATCTGATCACAGCTATGCCCTTTTGGACTTAGATTC
CCTGAAGAAAAAACTCTTCCTCACTCTGAAGGAAAATGAAAAGCTCCGGAAGCGCTTGCAGGCCCAGAGGCTGGTGATGC
GAAGGATGTCCAGCCGCCTCCGTGCTTGCAAAGGGCACCAGGGACTCCAGGCCAGACTTGGGCCAGAGCAGCAGAGCTGA
ATGCCGAAGTCGTGCGCGGCCCGGCAGTGCTGCAACCGCTACAGCAGCCGCAGGAAGCAGCTCACCTTCCACCGGTTTCC
GTTCAGCCGCCCGGAGCTGCTGAAGGAATGGGTGCTGAACATCGGCCGGGGCAACTTCAAGCCCAAGCAGCACACGGTCA
TCTGCTCCGAGCACTTCCGGCCAGAGTGCTTCAGCGCCTTTGGAAACCGCAAGAACCTAAAGCACAATGCCGTGCCCACG
GTGTTCGCCTTTCAGGACCCCACACAGCAGGTGAGGGAGAACACAGACCCTGCCAGTGAGAGAGGAAATGCCAGCTCTTC
TCAGAAAGAAAAGGTCCTCCCTGAGGCGGGGGCCGGAGAGGACAGTCCTGGGAGAAACATGGACACTGCACTTGAAGAGC
TTCAGTTGCCCCCAAATGCCGAAGGCCACGTAAAACAGGTCTCGCCACGGAGGCCGCAAGCAACAGAGGCTGTTGGCCGG
CCGACTGGCCCTGCAGGCCTGAGAAGGACCCCCAACAAGCAGCCATCTGATCACAGCTATGCCCTTTTGGACTTAGATTC
CCTGAAGAAAAAACTCTTCCTCACTCTGAAGGAAAATGAAAAGCTCCGGAAGCGCTTGCAGGCCCAGAGGCTGGTGATGC
GAAGGATGTCCAGCCGCCTCCGTGCTTGCAAAGGGCACCAGGGACTCCAGGCCAGACTTGGGCCAGAGCAGCAGAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 2 .34 RPM |
| bodymap2_lung | 8 .81 RPM |
| bodymap2_breast | 5 .84 RPM |
| bodymap2_adipose | 4 .67 RPM |
| bodymap2_adrenal | 5 .51 RPM |
| bodymap2_skeletal_muscle | 6 .13 RPM |
| bodymap2_thyroid | 7 .40 RPM |
| bodymap2_prostate | 10 .10 RPM |
| bodymap2_colon | 7 .12 RPM |
| bodymap2_testis | 11 .33 RPM |
| bodymap2_brain | 4 .41 RPM |
| bodymap2_heart | 2 .73 RPM |
| bodymap2_white_blood_cells | 5 .99 RPM |
| bodymap2_lymph_node | 9 .01 RPM |
| bodymap2_ovary | 5 .94 RPM |
| bodymap2_kidney | 6 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000177683 | within_species_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008620 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001935 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000093 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_198 | 88.24 | 63.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000041988 retrocopies