Parental gene: | TAF9, ENSG00000085231 |
| Aliases: | TAF9, MGC:5067, STAF31/32, TAF2G, TAFII-31, TAFII-32, TAFII31, TAFII32, TAFIID32 |
| Description: | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa [Source:HGNC Symbol;Acc:11542] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 5:68646810..68665840(-) |
>ENSG00000085231
ATGGAGTCTGGCAAGACGGCTTCTCCCAAGAGCATGCCGAAAGATGCACAGATGATGGCACAAATCCTGAAGGATATGGG
GATTACAGAATATGAGCCAAGAGTTATAAATCAGATGTTGGAGTTTGCCTTCCGATATGTGACCACAATTCTAGATGATG
CAAAAATTTATTCAAGCCATGCTAAGAAAGCTACTGTTGATGCAGATGATGTGCGATTGGCAATCCAGTGCCGCGCTGAT
CAGTCTTTTACCTCTCCTCCCCCAAGAGATTTTTTATTAGATATTGCAAGGCAAAGAAATCAAACCCCTTTGCCATTGAT
CAAGCCATATTCAGGTCCTAGGTTGCCACCTGATAGATACTGCTTAACAGCTCCAAACTATAGGCTGAAATCTTTACAGA
AAAAGGCATCAACTTCTGCGGGAAGAATAACAGTCCCGCGGTTAAGTGTTGGTTCAGTTACTAGCAGACCAAGTACTCCC
ACACTAGGCACACCAACCCCACAGACCATGTCTGTTTCAACTAAAGTAGGGACTCCCATGTCCCTCACAGGTCAAAGGTT
TACAGTACAGATGCCTACTTCTCAGTCTCCAGCTGTAAAAGCTTCAATTCCTGCAACCTCAGCAGTTCAGAATGTTCTGA
TTAATCCATCATTAATCGGGTCCAAAAACATTCTTATTACCACTAATATGATGTCATCACAAAATACTGCCAATGAATCA
TCAAATGCATTGAAAAGAAAACGTGAAGATGATGATGATGACGATGATGATGATGATGACTATGATAATCTGTAA
ATGGAGTCTGGCAAGACGGCTTCTCCCAAGAGCATGCCGAAAGATGCACAGATGATGGCACAAATCCTGAAGGATATGGG
GATTACAGAATATGAGCCAAGAGTTATAAATCAGATGTTGGAGTTTGCCTTCCGATATGTGACCACAATTCTAGATGATG
CAAAAATTTATTCAAGCCATGCTAAGAAAGCTACTGTTGATGCAGATGATGTGCGATTGGCAATCCAGTGCCGCGCTGAT
CAGTCTTTTACCTCTCCTCCCCCAAGAGATTTTTTATTAGATATTGCAAGGCAAAGAAATCAAACCCCTTTGCCATTGAT
CAAGCCATATTCAGGTCCTAGGTTGCCACCTGATAGATACTGCTTAACAGCTCCAAACTATAGGCTGAAATCTTTACAGA
AAAAGGCATCAACTTCTGCGGGAAGAATAACAGTCCCGCGGTTAAGTGTTGGTTCAGTTACTAGCAGACCAAGTACTCCC
ACACTAGGCACACCAACCCCACAGACCATGTCTGTTTCAACTAAAGTAGGGACTCCCATGTCCCTCACAGGTCAAAGGTT
TACAGTACAGATGCCTACTTCTCAGTCTCCAGCTGTAAAAGCTTCAATTCCTGCAACCTCAGCAGTTCAGAATGTTCTGA
TTAATCCATCATTAATCGGGTCCAAAAACATTCTTATTACCACTAATATGATGTCATCACAAAATACTGCCAATGAATCA
TCAAATGCATTGAAAAGAAAACGTGAAGATGATGATGATGACGATGATGATGATGATGACTATGATAATCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 39 .14 RPM |
| bodymap2_lung | 48 .29 RPM |
| bodymap2_breast | 52 .69 RPM |
| bodymap2_adipose | 48 .30 RPM |
| bodymap2_adrenal | 58 .05 RPM |
| bodymap2_skeletal_muscle | 39 .45 RPM |
| bodymap2_thyroid | 71 .33 RPM |
| bodymap2_prostate | 51 .79 RPM |
| bodymap2_colon | 49 .73 RPM |
| bodymap2_testis | 137 .33 RPM |
| bodymap2_brain | 72 .31 RPM |
| bodymap2_heart | 42 .53 RPM |
| bodymap2_white_blood_cells | 51 .64 RPM |
| bodymap2_lymph_node | 54 .62 RPM |
| bodymap2_ovary | 58 .10 RPM |
| bodymap2_kidney | 55 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000187325 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009140 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_134 | 51.88 | 89.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_987 | 84.81 | 91.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4016 | 89.19 | 87.57 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_4925 | 82.61 | 91.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000085231 retrocopies