Parental gene:

ORC3, ENSG00000135336

Aliases:ORC3, LAT, LATHEO, ORC3L
Description:origin recognition complex, subunit 3 [Source:HGNC Symbol;Acc:8489]
Organism:Human (Homo sapiens)
Coordinates:6:88299838..88377169(+)


>ENSG00000135336
ATGGCTACGTCCTCGATGTCTAAGGGTTGCTTTGTTTTTAAGCCAAACTCCAAAAAGAGAAAGATCTCTCTGCCAATAGA
GGACTATTTTAACAAAGGGAAAAATGAGCCTGAGGACAGTAAGCTTCGATTCGAAACTTATCAGTTGATATGGCAGCAGA
TGAAATCTGAAAATGAGCGACTACAAGAGGAATTAAATAAAAACTTGTTTGACAATCTGATTGAATTTCTGCAAAAATCA
CATTCTGGATTCCAGAAGAATTCAAGAGACTTGGGCGGTCAAATAAAACTCAGAGAAATTCCAACTGCTGCTCTTGTTCT
TGGTGTGAATGTCACAGATCATGATTTGACATTCGGAAGTCTAACAGAGGCCCTTCAGAATAATGTCACACCATATGTAG
TCTCATTGCAAGCTAAAGATTGTCCAGATATGAAACATTTTTTGCAAAAGTTGATCTCACAGTTGATGGACTGCTGTGTA
GATATAAAATCCAAAGAGGAGGAAAGTGTTCACGTCACCCAAAGAAAGACACATTATTCAATGGATTCACTTTCCAGTTG
GTATATGACTGTCACACAGAAGACGGACCCAAAAATGCTAAGCAAAAAAAGGACTACTTCTAGCCAATGGCAGTCTCCTC
CTGTTGTCGTTATCTTGAAGGATATGGAAAGCTTTGCCACAAAAGTACTACAAGACTTCATAATTATCAGCAGTCAACAT
CTCCATGAATTTCCACTAATACTCATTTTTGGAATAGCCACATCTCCTATTATCATCCACCGATTGCTTCCTCATGCAGT
ATCATCTCTATTGTGCATAGAACTGTTCCAATCTTTGTCTTGTAAGGAGCACCTGACTACGGTACTCGATAAGCTACTTC
TTACAACTCAGTTTCCCTTTAAAATAAATGAAAAAGTATTACAGGTTCTGACCAACATCTTTTTGTATCATGATTTCTCA
GTTCAAAACTTTATAAAAGGACTTCAGCTTTCTCTATTAGAGCATTTCTATTCCCAGCCCTTAAGTGTCCTGTGCTGTAA
TCTTCCAGAAGCCAAAAGAAGAATAAATTTTTTATCAAATAATCAATGTGAAAACATCCGACGTCTACCATCTTTTAGGA
GGTACGTGGAAAAGCAAGCTTCAGAAAAGCAAGTTGCGCTCTTGACCAATGAGAGATATTTGAAGGAGGAAACACAATTA
TTACTAGAAAACCTGCATGTTTATCATATGAATTACTTCCTGGTTTTGAGATGTCTTCATAAGTTCACCTCTTCTCTTCC
CAAGTATCCACTAGGTCGACAGATCAGAGAGTTGTACTGTACATGTTTAGAAAAGAACATATGGGATTCAGAGGAGTATG
CATCAGTCTTGCAGCTGCTGAGGATGTTGGCAAAGGATGAACTGATGACCATACTTGAGAAATGTTTCAAGGTTTTTAAG
TCTTATTGTGAAAACCACCTTGGCAGCACAGCTAAGAGAATAGAGGAGTTCCTGGCCCAGTTTCAGAGCCTCGATGCAGA
AACCAAAGAGGAAGAAGATGCTTCTGGGTCACAGCCAAAGGGGCTTCAGAAGACAGACCTCTATCATCTTCAGAAGTCCT
TATTGGAAATGAAGGAGTTAAGAAGAAGTAAGAAGCAAACCAAATTTGAAGTACTCAGAGAAAATGTTGTGAACTTCATT
GACTGTCTAGTGAGAGAATACCTTCTGCCTCCTGAGACACAGCCTCTCCATGAGGTGGTGTACTTCAGTGCTGCCCATGC
CCTTCGTGAGCATTTAAATGCTGCTCCGCGAATTGCCCTCCATACTGCACTCAACAATCCTTACTATTATCTCAAGAATG
AAGCACTGAAAAGCGAAGAAGGCTGCATTCCGAATATCGCCCCAGACATCTGCATAGCATACAAACTGCACCTAGAGTGT
AGCAGGCTCATCAACCTCGTGGACTGGTCAGAGGCTTTTGCAACAGTTGTGACAGCTGCTGAAAAAATGGATGCAAATTC
TGCAACCTCAGAAGAAATGAATGAAATTATCCATGCTCGGTTTATTAGAGCTGTTTCTGAACTAGAACTTTTAGGATTTA
TAAAACCTACCAAACAGAAGACTGACCATGTGGCAAGACTAACATGGGGAGGCTGCTAG

Library Parental gene expression (RPM)
bodymap2_liver 9 .00 RPM
bodymap2_lung 12 .34 RPM
bodymap2_breast 24 .32 RPM
bodymap2_adipose 17 .83 RPM
bodymap2_adrenal 21 .96 RPM
bodymap2_skeletal_muscle 27 .43 RPM
bodymap2_thyroid 33 .82 RPM
bodymap2_prostate 27 .56 RPM
bodymap2_colon 15 .66 RPM
bodymap2_testis 60 .05 RPM
bodymap2_brain 29 .28 RPM
bodymap2_heart 20 .90 RPM
bodymap2_white_blood_cells 16 .48 RPM
bodymap2_lymph_node 17 .41 RPM
bodymap2_ovary 42 .62 RPM
bodymap2_kidney 20 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000730 ortholog_one2one 1 retrogene
retro_cjac_913,
Macaca mulatta ENSMMUG00000002821 ortholog_one2one 1 retrogene
retro_mmul_1075,
Nomascus leucogenys ENSNLEG00000012990 ortholog_one2one 1 retrogene
retro_nleu_413,
Pongo abelii ENSPPYG00000016830 ortholog_one2one 1 retrogene
retro_pabe_712,
Pan troglodytes ENSPTRG00000018408 ortholog_one2one 1 retrogene
retro_ptro_555,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_798 88.86 61.74
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Download FASTA sequences of all ENSG00000135336 retrocopies