Parental gene: | GPATCH11, ENSG00000152133 |
| Aliases: | GPATCH11, CCDC75, CENP-Y, CENPY |
| Description: | G patch domain containing 11 [Source:HGNC Symbol;Acc:26768] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:37311593..37326387(+) |
>ENSG00000152133
ATGGCAGAAGAAGAGGACTATATGTCTGATTCCTTCATTAATGTCCAAGAAGATATCAGACCAGGATTGCCAATGCTAAG
GCAAATCCGAGAAGCCCGTCGAAAAGAAGAAAAGCAACAGGAAGCCAATTTGAAAAACAGGCAGAAGAGTTTAAAAGAAG
AAGAACAAGAAAGACGTGACATTGGGTTGAAGAATGCACTAGGCTGTGAAAACAAAGGGTTTGCCTTGCTCCAAAAGATG
GGCTATAAAAGTGGTCAGGCACTTGGCAAGAGTGGGGGTGGTATTGTTGAACCAATTCCTCTCAATATCAAAACAGGGAA
AAGTGGCATTGGTCATGAGGCATCATTAAAACGGAAAGCAGAGGAAAAATTGGAAAGCTACAGAAAAAAGATTCACATGA
AAAACCAAGCTGAAGAAAAAGCTGCAGAACAGTTTCGAATGCGACTTAAAAATAAGCAAGATGAAATGAAGCTAGAAGGA
GATCTCAGAAGAAGCCAGCGAGCCTGTCAACAACTGGATGTCCAGAAAAATATTCAGGTTCCCAGGGAAGCATGGTACTG
GTTGAGGCTTGAAGAGGAGACTGAAGAAGATGAAGAAGAAAAAGAACAGGATGAAGATGAATATAAGAGTGAAGATTTAA
GCGTACTGGAAAAATTACAAATATTGACTAGTTATTTAAGAGAAGAACATCTATATTGTATTTGGTGTGGAACAGCCTAT
GAAGATAAAGAAGACCTATCTTCAAATTGTCCAGGACCAACTTCTGCAGATCATGACTAA
ATGGCAGAAGAAGAGGACTATATGTCTGATTCCTTCATTAATGTCCAAGAAGATATCAGACCAGGATTGCCAATGCTAAG
GCAAATCCGAGAAGCCCGTCGAAAAGAAGAAAAGCAACAGGAAGCCAATTTGAAAAACAGGCAGAAGAGTTTAAAAGAAG
AAGAACAAGAAAGACGTGACATTGGGTTGAAGAATGCACTAGGCTGTGAAAACAAAGGGTTTGCCTTGCTCCAAAAGATG
GGCTATAAAAGTGGTCAGGCACTTGGCAAGAGTGGGGGTGGTATTGTTGAACCAATTCCTCTCAATATCAAAACAGGGAA
AAGTGGCATTGGTCATGAGGCATCATTAAAACGGAAAGCAGAGGAAAAATTGGAAAGCTACAGAAAAAAGATTCACATGA
AAAACCAAGCTGAAGAAAAAGCTGCAGAACAGTTTCGAATGCGACTTAAAAATAAGCAAGATGAAATGAAGCTAGAAGGA
GATCTCAGAAGAAGCCAGCGAGCCTGTCAACAACTGGATGTCCAGAAAAATATTCAGGTTCCCAGGGAAGCATGGTACTG
GTTGAGGCTTGAAGAGGAGACTGAAGAAGATGAAGAAGAAAAAGAACAGGATGAAGATGAATATAAGAGTGAAGATTTAA
GCGTACTGGAAAAATTACAAATATTGACTAGTTATTTAAGAGAAGAACATCTATATTGTATTTGGTGTGGAACAGCCTAT
GAAGATAAAGAAGACCTATCTTCAAATTGTCCAGGACCAACTTCTGCAGATCATGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 7 .73 RPM |
| bodymap2_lung | 7 .61 RPM |
| bodymap2_breast | 53 .23 RPM |
| bodymap2_adipose | 24 .97 RPM |
| bodymap2_adrenal | 17 .67 RPM |
| bodymap2_skeletal_muscle | 5 .91 RPM |
| bodymap2_thyroid | 17 .40 RPM |
| bodymap2_prostate | 16 .59 RPM |
| bodymap2_colon | 19 .01 RPM |
| bodymap2_testis | 36 .18 RPM |
| bodymap2_brain | 31 .93 RPM |
| bodymap2_heart | 9 .78 RPM |
| bodymap2_white_blood_cells | 42 .21 RPM |
| bodymap2_lymph_node | 22 .93 RPM |
| bodymap2_ovary | 12 .45 RPM |
| bodymap2_kidney | 18 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000006041 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004377 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000015289 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000027017 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011832 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2802 | 90.49 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000152133 retrocopies