Parental gene: | MED27, ENSG00000160563 |
| Aliases: | MED27, CRAP34, CRSP34, CRSP8, TRAP37 |
| Description: | mediator complex subunit 27 [Source:HGNC Symbol;Acc:2377] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 9:134735493..134955295(-) |
>ENSG00000160563
ATGGCGGACGTGATAAATGTCAGTGTGAACCTGGAGGCCTTTTCCCAGGCCATTAGTGCCATCCAGGCGCTGCGCTCCAG
CGTGAGCAGGGTGTTCGACTGCCTGAAGGATGGGATGCGGAACAAGGAGACGCTGGAGGGCCGGGAGAAGGCCTTTATTG
CGCACTTCCAGGACAACTTACATTCGGTCAACCGGGACCTCAATGAGCTGGAACGTCTGAGCAATCTGGTAGGCAAGCCA
TCTGAGAACCATCCTCTTCATAACAGTGGGCTGTTAAGCCTGGATCCTGTGCAGGACAAAACTCCTCTCTATAGTCAACT
CCTTCAAGCATATAAGTGGTCAAACAAGTTGCAGTACCATGCAGGACTAGCATCTGGCCTTTTAAATCAGCAGTCATTGA
AGCGTTCCGCTAATCAGATGGGAGTATCTGCCAAACGTAGACCAAAGGCTCAGCCCACAACTCTTGTCCTACCACCTCAA
TATGTTGATGATGTGATCAGCCGCATTGACAGGATGTTTCCTGAAATGTCCATCCACTTATCCAGACCCAATGGAACATC
AGCAATGCTTCTGGTGACCTTGGGAAAGGTGTTGAAAGTGATCGTCGTCATGCGGAGCCTGTTCATTGATCGAACAATAG
TAAAGGGATATAACGAGAATGTCTACACAGAAGATGGCAAGCTTGATATATGGTCCAAATCCAACTATCAAGTATTCCAG
AAGGTGACAGACCATGCCACCACTGCCCTGCTCCACTATCAGCTGCCCCAGATGCCGGATGTCGTGGTCCGATCCTTCAT
GACCTGGTTAAGAAGTTACATAAAGCTGTTCCAGGCCCCGTGCCAGCGCTGCGGGAAGTTTCTGCAGGACGGCCTTCCCC
CGACATGGAGGGATTTCCGAACCCTCGAAGCCTTCCATGACACCTGCCGGCAGTAG
ATGGCGGACGTGATAAATGTCAGTGTGAACCTGGAGGCCTTTTCCCAGGCCATTAGTGCCATCCAGGCGCTGCGCTCCAG
CGTGAGCAGGGTGTTCGACTGCCTGAAGGATGGGATGCGGAACAAGGAGACGCTGGAGGGCCGGGAGAAGGCCTTTATTG
CGCACTTCCAGGACAACTTACATTCGGTCAACCGGGACCTCAATGAGCTGGAACGTCTGAGCAATCTGGTAGGCAAGCCA
TCTGAGAACCATCCTCTTCATAACAGTGGGCTGTTAAGCCTGGATCCTGTGCAGGACAAAACTCCTCTCTATAGTCAACT
CCTTCAAGCATATAAGTGGTCAAACAAGTTGCAGTACCATGCAGGACTAGCATCTGGCCTTTTAAATCAGCAGTCATTGA
AGCGTTCCGCTAATCAGATGGGAGTATCTGCCAAACGTAGACCAAAGGCTCAGCCCACAACTCTTGTCCTACCACCTCAA
TATGTTGATGATGTGATCAGCCGCATTGACAGGATGTTTCCTGAAATGTCCATCCACTTATCCAGACCCAATGGAACATC
AGCAATGCTTCTGGTGACCTTGGGAAAGGTGTTGAAAGTGATCGTCGTCATGCGGAGCCTGTTCATTGATCGAACAATAG
TAAAGGGATATAACGAGAATGTCTACACAGAAGATGGCAAGCTTGATATATGGTCCAAATCCAACTATCAAGTATTCCAG
AAGGTGACAGACCATGCCACCACTGCCCTGCTCCACTATCAGCTGCCCCAGATGCCGGATGTCGTGGTCCGATCCTTCAT
GACCTGGTTAAGAAGTTACATAAAGCTGTTCCAGGCCCCGTGCCAGCGCTGCGGGAAGTTTCTGCAGGACGGCCTTCCCC
CGACATGGAGGGATTTCCGAACCCTCGAAGCCTTCCATGACACCTGCCGGCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 3 .87 RPM |
| bodymap2_lung | 9 .56 RPM |
| bodymap2_breast | 5 .23 RPM |
| bodymap2_adipose | 7 .39 RPM |
| bodymap2_adrenal | 12 .26 RPM |
| bodymap2_skeletal_muscle | 9 .60 RPM |
| bodymap2_thyroid | 9 .32 RPM |
| bodymap2_prostate | 10 .36 RPM |
| bodymap2_colon | 5 .63 RPM |
| bodymap2_testis | 16 .18 RPM |
| bodymap2_brain | 10 .13 RPM |
| bodymap2_heart | 6 .59 RPM |
| bodymap2_white_blood_cells | 10 .04 RPM |
| bodymap2_lymph_node | 5 .37 RPM |
| bodymap2_ovary | 10 .45 RPM |
| bodymap2_kidney | 7 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000010390 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000011556 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000364 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012828 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019706 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021492 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3342 | 98.39 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000160563 retrocopies