Parental gene: | APOA1BP, ENSG00000163382 |
| Aliases: | APOA1BP, AIBP, YJEFN1 |
| Description: | apolipoprotein A-I binding protein [Source:HGNC Symbol;Acc:18453] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:156561553..156564091(+) |
>ENSG00000163382
ATGTCCAGGCTGCGGGCGCTGCTGGGCCTCGGGCTGCTGGTTGCGGGCTCGCGCGTGCCGCGGATCAAAAGCCAGACCAT
CGCCTGTCGCTCGGGACCCACCTGGTGGGGACCGCAGCGGCTGAACTCGGGTGGCCGCTGGGACTCAGAGGTCATGGCGA
GCACGGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGAATACCAGTTCAGCGTG
GACCAACTTATGGAACTGGCCGGGCTGAGCTGTGCTACAGCCATCGCCAAGGCATATCCCCCCACGTCCATGTCCAGGAG
CCCCCCTACTGTCCTGGTCATCTGTGGCCCGGGGAATAATGGAGGAGATGGTCTGGTCTGTGCTCGACACCTCAAACTCT
TTGGCTACGAGCCAACCATCTATTACCCCAAAAGGCCTAACAAGCCCCTCTTCACTGCATTGGTGACCCAGTGTCAGAAA
ATGGACATCCCTTTCCTTGGGGAAATGCCCGCAGAGCCCATGACGATTGATGAACTGTATGAGCTGGTGGTGGATGCCAT
CTTTGGCTTCAGCTTCAAGGGCGATGTTCGGGAACCGTTCCACAGCATCCTGAGTGTCCTGAAGGGACTCACTGTGCCCA
TTGCCAGCATCGACATTCCCTCAGGATGGGACGTGGAGAAGGGAAATGCTGGAGGGATCCAGCCAGACTTGCTCATATCC
CTCACAGCCCCCAAAAAATCTGCAACCCAGTTTACCGGTCGCTACCATTACCTGGGGGGTCGTTTTGTGCCACCTGCTCT
GGAGAAGAAGTACCAGCTGAACCTGCCACCCTACCCTGACACCGAGTGTGTCTATCGTCTGCAGTGA
ATGTCCAGGCTGCGGGCGCTGCTGGGCCTCGGGCTGCTGGTTGCGGGCTCGCGCGTGCCGCGGATCAAAAGCCAGACCAT
CGCCTGTCGCTCGGGACCCACCTGGTGGGGACCGCAGCGGCTGAACTCGGGTGGCCGCTGGGACTCAGAGGTCATGGCGA
GCACGGTGGTGAAGTACCTGAGCCAGGAGGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGAATACCAGTTCAGCGTG
GACCAACTTATGGAACTGGCCGGGCTGAGCTGTGCTACAGCCATCGCCAAGGCATATCCCCCCACGTCCATGTCCAGGAG
CCCCCCTACTGTCCTGGTCATCTGTGGCCCGGGGAATAATGGAGGAGATGGTCTGGTCTGTGCTCGACACCTCAAACTCT
TTGGCTACGAGCCAACCATCTATTACCCCAAAAGGCCTAACAAGCCCCTCTTCACTGCATTGGTGACCCAGTGTCAGAAA
ATGGACATCCCTTTCCTTGGGGAAATGCCCGCAGAGCCCATGACGATTGATGAACTGTATGAGCTGGTGGTGGATGCCAT
CTTTGGCTTCAGCTTCAAGGGCGATGTTCGGGAACCGTTCCACAGCATCCTGAGTGTCCTGAAGGGACTCACTGTGCCCA
TTGCCAGCATCGACATTCCCTCAGGATGGGACGTGGAGAAGGGAAATGCTGGAGGGATCCAGCCAGACTTGCTCATATCC
CTCACAGCCCCCAAAAAATCTGCAACCCAGTTTACCGGTCGCTACCATTACCTGGGGGGTCGTTTTGTGCCACCTGCTCT
GGAGAAGAAGTACCAGCTGAACCTGCCACCCTACCCTGACACCGAGTGTGTCTATCGTCTGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 29 .83 RPM |
| bodymap2_lung | 27 .34 RPM |
| bodymap2_breast | 42 .10 RPM |
| bodymap2_adipose | 27 .81 RPM |
| bodymap2_adrenal | 48 .53 RPM |
| bodymap2_skeletal_muscle | 25 .72 RPM |
| bodymap2_thyroid | 41 .52 RPM |
| bodymap2_prostate | 43 .47 RPM |
| bodymap2_colon | 34 .92 RPM |
| bodymap2_testis | 39 .57 RPM |
| bodymap2_brain | 26 .18 RPM |
| bodymap2_heart | 34 .89 RPM |
| bodymap2_white_blood_cells | 24 .81 RPM |
| bodymap2_lymph_node | 35 .60 RPM |
| bodymap2_ovary | 42 .33 RPM |
| bodymap2_kidney | 55 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000000754 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002623 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012663 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000000713 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000001463 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1973 | 64.97 | 60.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3275 | 81.38 | 98.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000163382 retrocopies