Parental gene: | LRRC2, ENSG00000163827 |
| Aliases: | None |
| Description: | leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:14676] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 3:46556912..46621589(-) |
>ENSG00000163827
ATGGGACATAAAGTGGTTGTCTTCGACATTTCTGTCATCAGAGCCTTGTGGGAAACTCGTGTCAAGAAGCACAAAGCTTG
GCAGAAGAAGGAGGTGGAAAGGCTTGAGAAGAGCGCCTTGGAGAAGATAAAGGAGGAGTGGAACTTTGTGGCCGAATGCA
GGAGGAAGGGCATCCCCCAGGCTGTATACTGCAAGAATGGCTTCATAGACACCAGCGTGCGGCTTCTGGACAAGATTGAA
AGGAACACTCTCACAAGGCAGAGTTCACTTCCCAAGGACAGAGGCAAACGGAGCAGTGCGTTTGTGTTTGAACTTTCTGG
GGAGCACTGGACGGAGCTCCCAGATTCATTGAAGGAGCAGACACACCTGAGAGAATGGTACATAAGCAATACCTTGATTC
AAATCATTCCTACATATATTCAGTTATTTCAAGCGATGAGAATTCTGGATCTGCCAAAAAACCAAATCTCACATCTTCCA
GCAGAAATCGGTTGTTTGAAGAACCTGAAAGAACTCAATGTGGGTTTCAACTATCTGAAGAGCATTCCTCCAGAATTGGG
AGATTGTGAAAATCTAGAGAGACTGGATTGTTCTGGAAATCTAGAATTAATGGAGCTGCCCTTTGAATTAAGTAATTTGA
AGCAAGTTACATTTGTAGATATCTCAGCAAACAAGTTTTCCAGTGTCCCAATCTGTGTCCTGCGGATGTCGAATTTGCAG
TGGTTGGATATCAGCAGCAATAACCTGACCGACCTGCCGCAAGATATAGACAGGCTAGAGGAGCTGCAGAGCTTTCTCTT
GTATAAAAACAAGTTGACCTACCTTCCCTATTCCATGCTGAACCTGAAGAAGCTCACTCTGTTAGTCGTCAGTGGGGACC
ATTTGGTGGAGCTCCCAACTGCCCTTTGTGACTCATCCACACCTTTAAAATTTGTAAGCCTTATGGACAATCCTATTGAT
AATGCCCAATGTGAAGATGGCAATGAAATAATGGAAAGTGAACGGGATCGCCAACATTTTGATAAAGAAGTTATGAAAGC
CTATATTGAAGACCTTAAAGAAAGAGAATCTGTTCCCAGCTATACCACCAAAGTGTCTTTTAGCCTTCAACTTTGA
ATGGGACATAAAGTGGTTGTCTTCGACATTTCTGTCATCAGAGCCTTGTGGGAAACTCGTGTCAAGAAGCACAAAGCTTG
GCAGAAGAAGGAGGTGGAAAGGCTTGAGAAGAGCGCCTTGGAGAAGATAAAGGAGGAGTGGAACTTTGTGGCCGAATGCA
GGAGGAAGGGCATCCCCCAGGCTGTATACTGCAAGAATGGCTTCATAGACACCAGCGTGCGGCTTCTGGACAAGATTGAA
AGGAACACTCTCACAAGGCAGAGTTCACTTCCCAAGGACAGAGGCAAACGGAGCAGTGCGTTTGTGTTTGAACTTTCTGG
GGAGCACTGGACGGAGCTCCCAGATTCATTGAAGGAGCAGACACACCTGAGAGAATGGTACATAAGCAATACCTTGATTC
AAATCATTCCTACATATATTCAGTTATTTCAAGCGATGAGAATTCTGGATCTGCCAAAAAACCAAATCTCACATCTTCCA
GCAGAAATCGGTTGTTTGAAGAACCTGAAAGAACTCAATGTGGGTTTCAACTATCTGAAGAGCATTCCTCCAGAATTGGG
AGATTGTGAAAATCTAGAGAGACTGGATTGTTCTGGAAATCTAGAATTAATGGAGCTGCCCTTTGAATTAAGTAATTTGA
AGCAAGTTACATTTGTAGATATCTCAGCAAACAAGTTTTCCAGTGTCCCAATCTGTGTCCTGCGGATGTCGAATTTGCAG
TGGTTGGATATCAGCAGCAATAACCTGACCGACCTGCCGCAAGATATAGACAGGCTAGAGGAGCTGCAGAGCTTTCTCTT
GTATAAAAACAAGTTGACCTACCTTCCCTATTCCATGCTGAACCTGAAGAAGCTCACTCTGTTAGTCGTCAGTGGGGACC
ATTTGGTGGAGCTCCCAACTGCCCTTTGTGACTCATCCACACCTTTAAAATTTGTAAGCCTTATGGACAATCCTATTGAT
AATGCCCAATGTGAAGATGGCAATGAAATAATGGAAAGTGAACGGGATCGCCAACATTTTGATAAAGAAGTTATGAAAGC
CTATATTGAAGACCTTAAAGAAAGAGAATCTGTTCCCAGCTATACCACCAAAGTGTCTTTTAGCCTTCAACTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 10 .14 RPM |
| bodymap2_lung | 2 .37 RPM |
| bodymap2_breast | 11 .65 RPM |
| bodymap2_adipose | 3 .66 RPM |
| bodymap2_adrenal | 2 .15 RPM |
| bodymap2_skeletal_muscle | 311 .96 RPM |
| bodymap2_thyroid | 76 .10 RPM |
| bodymap2_prostate | 21 .20 RPM |
| bodymap2_colon | 11 .68 RPM |
| bodymap2_testis | 6 .00 RPM |
| bodymap2_brain | 6 .26 RPM |
| bodymap2_heart | 182 .82 RPM |
| bodymap2_white_blood_cells | 0 .16 RPM |
| bodymap2_lymph_node | 7 .07 RPM |
| bodymap2_ovary | 7 .85 RPM |
| bodymap2_kidney | 24 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002149 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004427 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013932 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014852 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2346 | 79.27 | 51.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000163827 retrocopies