Parental gene: | PATL1, ENSG00000166889 |
| Aliases: | PATL1, Pat1b, hPat1b |
| Description: | protein associated with topoisomerase II homolog 1 (yeast) [Source:HGNC Symbol;Acc:26721] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:59404188..59436453(-) |
>ENSG00000166889
ATGTTCCGCTACGAGTCTTTGGAGGATTGTCCTCTGGATGAAGATGAAGATGCATTTCAGGGACTGGGAGAAGAAGATGA
AGAGATTGATCAATTCAATGATGATACATTTGGGTCAGGTGCAGTTGATGATGATTGGCAGGAAGCACATGAGCGCCTGG
CTGAATTGGAAGAAAAGCTACCAGTGGCAGTTAATGAACAAACAGGCAATGGAGAGAGAGATGAAATGGACTTGTTGGGT
GACCATGAGGAGAATCTGGCAGAAAGGCTCAGTAAGATGGTGATTGAAAATGAACTAGAAGATCCAGCTATTATGAGGGC
AGTGCAGACCAGGCCAGTTTTACAACCCCAACCAGGAAGTCTGAATTCCAGTATCTGGGATGGATCTGAAGTTCTGAGGC
GAATCCGAGGACCACTGCTTGCTCAGGAAATGCCTACAGTGTCTGTATTAGAATATGCTTTGCCTCAGAGGCCCCCCCAG
GGTCCAGAAGATGATCGGGACCTTTCTGAACGAGCATTACCAAGGCGGTCAACTTCACCTATCATTGGCAGTCCTCCTGT
TAGAGCTGTCCCCATAGGCACCCCACCTAAACAGATGGCTGTACCCAGCTTCACCCAACAGATTCTGTGTCCGAAGCCTG
TCCATGTTCGGCCCCCAATGCCACCTCGTTATCCTGCTCCCTATGGTGAGAGGATGTCTCCAAACCAGCTCTGCAGTGTC
CCGAACTCTTCCCTCCTGGGTCACCCTTTTCCTCCTAGTGTTCCTCCTGTTCTCAGCCCCCTCCAGAGAGCACAGCTTCT
TGGAGGAGCACAGCTACAGCCTGGACGGATGTCTCCCAGCCAGTTTGCACGGGTCCCTGGATTTGTTGGTAGTCCACTTG
CTGCCATGAATCCCAAGTTGCTACAAGGGCGAGTTGGGCAGATGCTTCCCCCAGCACCAGGCTTCCGTGCCTTCTTTAGT
GCTCCACCCTCCGCTACACCACCTCCACAGCAGCACCCTCCTGGCCCAGGACCCCACCTGCAAAACCTAAGATCTCAGGC
CCCAATGTTTAGACCGGACACAACTCACCTCCATCCACAGCACCGTCGACTCTTGCATCAGAGACAGCAACAGAATAGAA
GTCAGCATCGGAATCTCAATGGTGCGGGAGATAGAGGAAGTCACCGGAGCAGTCATCAAGATCATCTCCGAAAGGATCCA
TATGCCAATCTCATGTTGCAGCGGGAAAAGGATTGGGTCTCTAAAATCCAGATGATGCAACTGCAAAGCACTGATCCCTA
CCTGGATGATTTTTATTACCAGAATTACTTTGAAAAACTGGAGAAACTGTCAGCTGCTGAAGAAATACAAGGTGATGGCC
CTAAGAAGGAGCGCACCAAGCTTATCACCCCTCAGGTGGCCAAACTGGAGCACGCCTATAAGCCAGTGCAATTTGAGGGC
TCTTTGGGAAAGCTTACCGTTTCTAGTGTGAATAATCCCCGAAAAATGATTGATGCTGTTGTGACATCTCGGAGTGAGGA
TGATGAGACAAAAGAAAAACAAGTTCGAGACAAGAGGAGAAAAACCCTTGTTATAATTGAGAAAACCTACAGCTTACTCC
TTGATGTGGAGGACTATGAAAGACGTTATCTCCTAAGTCTGGAAGAAGAGCGACCTGCCCTAATGGATGACAGAAAGCAC
AAAATTTGTAGCATGTATGACAACTTAAGGGGGAAATTGCCTGGACAAGAGAGGCCTAGTGATGACCACTTTGTACAGAT
CATGTGTATCCGAAAAGGGAAGAGAATGGTTGCCCGTATTCTTCCTTTCCTCTCCACAGAGCAAGCAGCTGACATTCTCA
TGACAACAGCCAGGAACCTCCCTTTCCTTATCAAGAAGGATGCACAAGATGAGGTGCTGCCATGCTTACTGAGTCCCTTC
TCTCTCCTTCTCTATCATCTTCCATCAGTGAGTATCACCAGCCTTTTGCGACAGCTAATGAACCTACCTCAAAGTGCAGC
TACACCAGCACTCTCCAATCCTCACCTCACTGCTGTGCTCCAGAACAAGTTTGGCCTGTCACTGCTCCTCATCCTCCTGA
GCCGTGGTGAAGACCTACAGAGTTCAGACCCTGCTACAGAATCAACACAAAATAATCAGTGGACGGAGGTGATGTTCATG
GCAACACGAGAACTTCTGCGGATTCCCCAAGCAGCCCTGGCCAAGCCAATCTCTATACCTACAAACCTAGTGTCCCTCTT
TTCTCGCTATGTTGACCGGCAGAAACTGAACTTGCTGGAGACAAAACTGCAGCTAGTTCAGGGGATACGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 48 .08 RPM |
| bodymap2_adrenal | 50 .50 RPM |
| bodymap2_brain | 27 .42 RPM |
| bodymap2_breast | 31 .07 RPM |
| bodymap2_colon | 36 .97 RPM |
| bodymap2_heart | 36 .35 RPM |
| bodymap2_kidney | 39 .73 RPM |
| bodymap2_liver | 39 .56 RPM |
| bodymap2_lung | 70 .02 RPM |
| bodymap2_lymph_node | 47 .88 RPM |
| bodymap2_ovary | 70 .46 RPM |
| bodymap2_prostate | 51 .67 RPM |
| bodymap2_skeletal_muscle | 115 .22 RPM |
| bodymap2_testis | 42 .10 RPM |
| bodymap2_thyroid | 52 .90 RPM |
| bodymap2_white_blood_cells | 83 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pan troglodytes | ENSPTRG00000003697 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2059 | 85.59 | 62.08 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000166889 retrocopies