Parental gene:

GALNT11, ENSG00000178234

Aliases:GALNT11, GALNACT11
Description:UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:HGNC Symbol;Acc:19875]
Organism:Human (Homo sapiens)
Coordinates:7:151722758..151819425(+)


>ENSG00000178234
ATGGGAAGTGTCACAGTTCGGTATTTCTGTTATGGGTGCCTTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTA
TTTCAACTTCAGTGAAGTGACTCAGCCACTTAAGAATGTGCCCGTCAAGGGGTCTGGGCCCCACGGACCATCTCCAAAAA
AATTCTATCCCCGTTTCACTCGAGGCCCAAGTCGAGTGCTCGAGCCACAGTTCAAAGCAAACAAAATTGACGATGTGATA
GACAGTCGTGTTGAAGATCCAGAAGAAGGCCACTTGAAATTCTCTTCTGAATTAGGTATGATTTTTAATGAACGCGATCA
AGAGTTGAGAGACTTGGGCTATCAGAAACATGCTTTTAATATGCTTATCAGTGACCGCTTGGGCTACCACAGAGATGTGC
CAGACACAAGGAATGCAGCATGTAAAGAAAAGTTCTACCCACCTGACCTGCCAGCTGCTAGTGTTGTTATCTGTTTCTAT
AATGAAGCGTTTTCTGCCTTGCTTCGGACAGTGCACAGTGTCATAGACCGCACGCCAGCACACCTGCTTCATGAGATCAT
CCTTGTGGATGATGATAGTGACTTTGATGATTTGAAAGGAGAACTAGATGAATATGTCCAAAAATACCTCCCTGGAAAAA
TTAAAGTCATAAGAAATACAAAGCGTGAGGGGTTGATTCGAGGGAGAATGATTGGCGCGGCCCACGCGACAGGAGAAGTC
CTTGTGTTCCTGGACAGCCACTGTGAAGTGAATGTGATGTGGCTGCAGCCCTTGCTGGCCGCCATCCGTGAGGACCGGCA
CACCGTGGTGTGCCCAGTGATTGACATCATCAGCGCCGACACGCTGGCCTACAGCTCGTCCCCTGTCGTCCGCGGAGGGT
TCAACTGGGGACTGCACTTCAAATGGGATCTTGTCCCCCTTTCTGAGCTAGGACGAGCGGAGGGAGCCACTGCACCAATA
AAGTCACCAACAATGGCTGGAGGTTTGTTTGCCATGAACAGACAGTATTTCCATGAACTTGGACAGTATGATAGTGGCAT
GGATATCTGGGGAGGAGAAAATTTGGAAATATCATTTCGGATCTGGATGTGTGGCGGTAAGCTCTTCATCATCCCTTGCT
CTAGAGTAGGACACATTTTCCGAAAAAGGCGACCATATGGATCTCCCGAAGGCCAGGACACCATGACACACAACTCTTTG
CGGCTGGCACATGTCTGGTTGGATGAATACAAGGAGCAGTATTTTTCCTTAAGACCTGACCTGAAGACGAAAAGCTATGG
CAATATCAGTGAGCGTGTGGAACTGAGAAAGAAGTTGGGCTGTAAATCATTTAAATGGTATTTGGATAATGTATACCCAG
AGATGCAGATATCTGGGTCCCACGCCAAACCCCAACAACCCATTTTTGTCAATAGAGGGCCAAAACGACCCAAAGTCCTT
CAACGTGGAAGGCTCTATCACCTCCAGACCAACAAATGCCTGGTGGCCCAGGGCCGCCCAAGTCAGAAGGGAGGTCTCGT
GGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGATCTGGATCTATAATGAAGAGCATGAATTGGTTTTAAATAGTC
TCCTTTGTCTAGATATGTCAGAGACTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACGGGTCAGGAGGATCCCAG
CAGTGGACCTTTGGGAAAAACAATCGGCTATACCAGGTGTCGGTTGGACAGTGCCTGAGAGCAGTGGATCCCCTGGGTCA
GAAGGGCTCTGTCGCCATGGCGATCTGCGATGGCTCCTCTTCACAGCAGTGGCATTTGGAAGGTTAA

Library Parental gene expression (RPM)
bodymap2_liver 13 .27 RPM
bodymap2_lung 29 .34 RPM
bodymap2_breast 38 .07 RPM
bodymap2_adipose 29 .60 RPM
bodymap2_adrenal 35 .21 RPM
bodymap2_skeletal_muscle 9 .11 RPM
bodymap2_thyroid 51 .48 RPM
bodymap2_prostate 54 .45 RPM
bodymap2_colon 30 .51 RPM
bodymap2_testis 25 .72 RPM
bodymap2_brain 46 .97 RPM
bodymap2_heart 18 .74 RPM
bodymap2_white_blood_cells 27 .44 RPM
bodymap2_lymph_node 35 .21 RPM
bodymap2_ovary 43 .10 RPM
bodymap2_kidney 84 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001121 ortholog_one2one 1 retrogene
retro_chof_1535,
Gorilla gorilla ENSGGOG00000008784 ortholog_one2one 1 retrogene
retro_ggor_399,
Nomascus leucogenys ENSNLEG00000004613 ortholog_one2one 1 retrogene
retro_nleu_1573,
Pan troglodytes ENSPTRG00000019891 ortholog_one2one 1 retrogene
retro_ptro_308,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_402 72.85 71.55
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Download FASTA sequences of all ENSG00000178234 retrocopies