Parental gene: | SAPCD2, ENSG00000186193 |
| Aliases: | SAPCD2, C9orf140, p42.3 |
| Description: | suppressor APC domain containing 2 [Source:HGNC Symbol;Acc:28055] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 9:139956580..139965040(-) |
>ENSG00000186193
ATGGCCGGGGCCGCCATGGCCGAGCGGGGCCGCGTGCCTCCCCCCGCACCCGCGCCCAGCACGGAGGGGCTGCCGCGCGC
CTTCCTGCAGAGCCTGCGCACCCTGTTCGACATCCTGGACGACCGGCGGCGCGGCTGCGTGCACCTGCGCGAGATCGAGT
CCCGCTGGCAGGGCACCGACGCGCGGGAGCTGCCCCGCGGGGTGCTGGAGGGCTTGCGCCAGGTGGCCCCGGCCAGCGGC
TACCTGACCTTCGAGCGCTTCGTGGCCGGCCTGCGCACCTCCCTGCTGAGCGCCGACGGCGGCCCCCGGGACCCCACGCG
CGCCCCGGCCCGGCCCGGGGATCAGCCGCCGCCGCCGCCGCAGCGCCTGGTGTTCGCTCCGGCCGACGAGCCGCGGACGG
TCCTGGAGAGGAAGCCCCTGCCCCTGGGCGTGCGCGCCCCTCTGGCCGGTCCCAGCGCCGCCGCCCGCAGCCCGGAGCAG
CTGTGCGCCCCGGCTGAGGCGGCGCCCTGCCCCGCGGAGCCCGAGCGGTCCCAGAGCGCGGCGCTGGAACCGAGCTCCAG
CGCGGACGCAGGTGCAGTGGCGTGCAGGGCCCTGGAGGCGGACTCAGGGGATGCCCGGCGGGCTCCCCGTGCCCGAGGGG
AACGTCGGAGGCACACCATCGCCAGCGGCGTGGACTGCGGCCTGCTGAAGCAGATGAAGGAGCTGGAGCAGGAGAAGGAG
GTGCTGCTGCAGGGTTTGGAGATGATGGCGCGGGGCCGCGACTGGTACCAGCAGCAGCTGCAACGAGTGCAGGAGCGCCA
GCGCCGCCTGGGCCAGAGCAGAGCCAGCGCCGACTTTGGGGCTGCAGGGAGCCCCCGCCCACTGGGGCGGCTACTGCCCA
AGGTACAAGAGGTGGCCCGGTGCCTGGGGGAGCTGCTGGCTGCAGCCTGTGCCAGCCGGGCCCTGCCCCCGTCCTCCTCC
GGGCCCCCCTGCCCTGCCCTGACGTCCACCTCACCCCCGGTCTGGCAGCAGCAGACCATCCTCATGCTGAAGGAGCAGAA
CCGACTCCTCACCCAGGAGGTGACCGAGAAGAGTGAGCGCATCACGCAGCTGGAGCAGGAGAAGTCGGCGCTCATTAAGC
AGCTGTTTGAGGCCCGCGCCCTGAGCCAGCAGGACGGGGGACCTCTGGATTCCACCTTCATCTAG
ATGGCCGGGGCCGCCATGGCCGAGCGGGGCCGCGTGCCTCCCCCCGCACCCGCGCCCAGCACGGAGGGGCTGCCGCGCGC
CTTCCTGCAGAGCCTGCGCACCCTGTTCGACATCCTGGACGACCGGCGGCGCGGCTGCGTGCACCTGCGCGAGATCGAGT
CCCGCTGGCAGGGCACCGACGCGCGGGAGCTGCCCCGCGGGGTGCTGGAGGGCTTGCGCCAGGTGGCCCCGGCCAGCGGC
TACCTGACCTTCGAGCGCTTCGTGGCCGGCCTGCGCACCTCCCTGCTGAGCGCCGACGGCGGCCCCCGGGACCCCACGCG
CGCCCCGGCCCGGCCCGGGGATCAGCCGCCGCCGCCGCCGCAGCGCCTGGTGTTCGCTCCGGCCGACGAGCCGCGGACGG
TCCTGGAGAGGAAGCCCCTGCCCCTGGGCGTGCGCGCCCCTCTGGCCGGTCCCAGCGCCGCCGCCCGCAGCCCGGAGCAG
CTGTGCGCCCCGGCTGAGGCGGCGCCCTGCCCCGCGGAGCCCGAGCGGTCCCAGAGCGCGGCGCTGGAACCGAGCTCCAG
CGCGGACGCAGGTGCAGTGGCGTGCAGGGCCCTGGAGGCGGACTCAGGGGATGCCCGGCGGGCTCCCCGTGCCCGAGGGG
AACGTCGGAGGCACACCATCGCCAGCGGCGTGGACTGCGGCCTGCTGAAGCAGATGAAGGAGCTGGAGCAGGAGAAGGAG
GTGCTGCTGCAGGGTTTGGAGATGATGGCGCGGGGCCGCGACTGGTACCAGCAGCAGCTGCAACGAGTGCAGGAGCGCCA
GCGCCGCCTGGGCCAGAGCAGAGCCAGCGCCGACTTTGGGGCTGCAGGGAGCCCCCGCCCACTGGGGCGGCTACTGCCCA
AGGTACAAGAGGTGGCCCGGTGCCTGGGGGAGCTGCTGGCTGCAGCCTGTGCCAGCCGGGCCCTGCCCCCGTCCTCCTCC
GGGCCCCCCTGCCCTGCCCTGACGTCCACCTCACCCCCGGTCTGGCAGCAGCAGACCATCCTCATGCTGAAGGAGCAGAA
CCGACTCCTCACCCAGGAGGTGACCGAGAAGAGTGAGCGCATCACGCAGCTGGAGCAGGAGAAGTCGGCGCTCATTAAGC
AGCTGTTTGAGGCCCGCGCCCTGAGCCAGCAGGACGGGGGACCTCTGGATTCCACCTTCATCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 0 .02 RPM |
| bodymap2_lung | 0 .35 RPM |
| bodymap2_breast | 0 .76 RPM |
| bodymap2_adipose | 0 .06 RPM |
| bodymap2_adrenal | 0 .74 RPM |
| bodymap2_skeletal_muscle | 0 .00 RPM |
| bodymap2_thyroid | 0 .49 RPM |
| bodymap2_prostate | 1 .63 RPM |
| bodymap2_colon | 1 .84 RPM |
| bodymap2_testis | 0 .36 RPM |
| bodymap2_brain | 4 .73 RPM |
| bodymap2_heart | 0 .15 RPM |
| bodymap2_white_blood_cells | 1 .16 RPM |
| bodymap2_lymph_node | 2 .49 RPM |
| bodymap2_ovary | 0 .10 RPM |
| bodymap2_kidney | 0 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000007112 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008908 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000019804 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000021589 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3734 | 78.50 | 73.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3738 | 82.12 | 69.29 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000186193 retrocopies