Parental gene:

SEPHS1, ENSGGOG00000003806

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:10:13687178..13716989(-)


>ENSGGOG00000003806
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTAGAATCTTTACAGGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCATGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGACGACCCTTACATGATGGGCAGGATAGCGTGTGCCAATGT
CCTCAGTGACCTCTATGCAATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACCG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACATCTGTAACA
GGCGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTGGCTACCACTGTCTGCCAGCCCAATGAATTTATCAT
GCCGGTCTTTGGTTTTAGGATGGTCTTGGCAGGTTTACCTTCCACTGAGATCATAATCCCTCTGCATAGTTTTTTTAGTT
TACTGGAAGAGTGGCTCAAAATTGCGATTTCATTATTCCAATATGTCATCTCCCTGACAAGTAAGAAAGGTGTTTTTTCT
CAGAGTCGCCCCCTCTCTCTCCCAGCTGCAGGACTCATGCACACGTTCAATGCTCACGCTGCCACTGACATCACGGGCTT
CGGGATTTTGGGTCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCGTTTGTAATTCACAACCTCCCGGTGC
TGGCCAAGATGGCTGCGGTGAGCAAGGCCTGCGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCGGAGACTTCAGGC
GGCCTTCTCATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGAAGGCCA
CCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCCAGAATCATAGACAAACCCCGGATCATCGAGGTCG
CACCGCAAGTGGCCACTCAAAATGTGAATCCCACACCCGGGGCCACCTCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .20 RPM
SRP007412_cerebellum 19 .11 RPM
SRP007412_heart 6 .82 RPM
SRP007412_kidney 33 .49 RPM
SRP007412_liver 14 .24 RPM
SRP007412_testis 19 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009494 possible_ortholog 2 retrogenes
retro_cjac_166, retro_cjac_2219,
Myotis lucifugus ENSMLUG00000001971 ortholog_one2one 2 retrogenes
retro_mluc_2350, retro_mluc_728,
Macaca mulatta ENSMMUG00000021233 possible_ortholog 4 retrogenes
retro_mmul_1607, retro_mmul_2495, retro_mmul_2647, retro_mmul_922,
Monodelphis domestica ENSMODG00000016864 ortholog_one2one 1 retrogene
retro_mdom_86,
Nomascus leucogenys ENSNLEG00000012205 possible_ortholog 7 retrogenes
retro_nleu_1868, retro_nleu_2211, retro_nleu_234, retro_nleu_2668, retro_nleu_2873, retro_nleu_3004, retro_nleu_327,
Pteropus vampyrus ENSPVAG00000002945 ortholog_one2one 2 retrogenes
retro_pvam_115, retro_pvam_566,
Rattus norvegicus ENSRNOG00000018125 possible_ortholog 1 retrogene
retro_rnor_59,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_147 70.44 80.77
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2. retro_ggor_2924 76.85 75.38
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Download FASTA sequences of all ENSGGOG00000003806 retrocopies