Parental gene: | USP46, ENSGGOG00000017197 |
| Aliases: | None |
| Description: | Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:G3RLX0] |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 4:60785673..60851508(-) |
>ENSGGOG00000017197
CTTTCTGTGAGAGGAGATGCCAGTTGTGAGTCCAAAATAGGCACCAATGCCTCTGCTCTGGAAAAAGACATTGGTCCAGA
GCAGTTTCCAATCAATGAACACTATTTCGGATTGGTCAATTTTGGAAACACATGCTACTGTAACTCCGTGCTTCAGGCAT
TGTACTTCTGCCGTCCATTCCGGGAGAATGTGTTGGCATACAAGGCCCAGCAAAAGAAGAAGGAAAACTTGCTGACGTGC
CTGGCGGACCTTTTCCACAGCATTGCCACGCAGAAGAAGAAGGTTGGCGTCATCCCACCAAAGAAGTTCATTTCAAGGCT
GAGAAAAGAGAATGATCTCTTTGATAACTACATGCAGCAGGATGCTCATGAATTTTTAAATTATTTGCTAAACACTATTG
CGGACATCCTGCAGGAGGAGAAGAAACAGGAAAAACAAAATGGAAAATTAAAAAATGGCAACATGAACGAACCTGCGGAA
AATAATAAACCAGAACTCACCTGGGTCCATGAGATTTTTCAGGGAACGCTTACCAATGAAACTCGATGCTTGAACTGTGA
AACTGTTAGTAGCAAAGATGAAGATTTTCTTGACCTTTCTGTTGATGTGGAGCAGAATACATCCATTACCCACTGTCTAA
GAGACTTCAGCAACACAGAAACACTGTGTAGTGAACAAAAATATTATTGTGAAACATGCTGCAGCAAACAAGAAGCCCAG
AAAAGGATGAGGGTAAAAAAGCTGCCCATGATCTTGGCCCTGCACCTAAAGCGGTTCAAGTACATGGAGCAGCTGCACAG
ATACACCAAGCTGTCTTACCGTGTGGTCTTCCCTCTGGAACTCCGGCTCTTCAACACCTCCAGTGATGCAGTGAACCTGG
ACCGCATGTATGACTTGGTTGCCGTGGTCGTTCACTGTGGCAGTGGTCCTAATCGTGGGCATTATATCACTATTGTGAAA
AGTCATGGCTTCTGGCTTTTGTTTGATGATGACATTGTAGAGAAAATAGATGCTCAAGCTATTGAAGAATTCTATGGCCT
GACGTCAGATATATCAAAAAATTCAGAATCTGGATATATTTTATTCTATCAGTCAAGAGAGTAA
CTTTCTGTGAGAGGAGATGCCAGTTGTGAGTCCAAAATAGGCACCAATGCCTCTGCTCTGGAAAAAGACATTGGTCCAGA
GCAGTTTCCAATCAATGAACACTATTTCGGATTGGTCAATTTTGGAAACACATGCTACTGTAACTCCGTGCTTCAGGCAT
TGTACTTCTGCCGTCCATTCCGGGAGAATGTGTTGGCATACAAGGCCCAGCAAAAGAAGAAGGAAAACTTGCTGACGTGC
CTGGCGGACCTTTTCCACAGCATTGCCACGCAGAAGAAGAAGGTTGGCGTCATCCCACCAAAGAAGTTCATTTCAAGGCT
GAGAAAAGAGAATGATCTCTTTGATAACTACATGCAGCAGGATGCTCATGAATTTTTAAATTATTTGCTAAACACTATTG
CGGACATCCTGCAGGAGGAGAAGAAACAGGAAAAACAAAATGGAAAATTAAAAAATGGCAACATGAACGAACCTGCGGAA
AATAATAAACCAGAACTCACCTGGGTCCATGAGATTTTTCAGGGAACGCTTACCAATGAAACTCGATGCTTGAACTGTGA
AACTGTTAGTAGCAAAGATGAAGATTTTCTTGACCTTTCTGTTGATGTGGAGCAGAATACATCCATTACCCACTGTCTAA
GAGACTTCAGCAACACAGAAACACTGTGTAGTGAACAAAAATATTATTGTGAAACATGCTGCAGCAAACAAGAAGCCCAG
AAAAGGATGAGGGTAAAAAAGCTGCCCATGATCTTGGCCCTGCACCTAAAGCGGTTCAAGTACATGGAGCAGCTGCACAG
ATACACCAAGCTGTCTTACCGTGTGGTCTTCCCTCTGGAACTCCGGCTCTTCAACACCTCCAGTGATGCAGTGAACCTGG
ACCGCATGTATGACTTGGTTGCCGTGGTCGTTCACTGTGGCAGTGGTCCTAATCGTGGGCATTATATCACTATTGTGAAA
AGTCATGGCTTCTGGCTTTTGTTTGATGATGACATTGTAGAGAAAATAGATGCTCAAGCTATTGAAGAATTCTATGGCCT
GACGTCAGATATATCAAAAAATTCAGAATCTGGATATATTTTATTCTATCAGTCAAGAGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 52 .17 RPM |
| SRP007412_cerebellum | 41 .33 RPM |
| SRP007412_heart | 10 .38 RPM |
| SRP007412_kidney | 25 .64 RPM |
| SRP007412_liver | 6 .86 RPM |
| SRP007412_testis | 26 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000007660 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1767 | 63.51 | 79.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2223 | 80.33 | 81.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2937 | 83.06 | 97.55 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000017197 retrocopies