Parental gene:

RPL23, ENSMLUG00000015673

Aliases:None
Description:ribosomal protein L23 [Source:HGNC Symbol;Acc:10316]
Organism:Microbat (Myotis lucifugus)
Coordinates:AAPE02062447:12860..16285(-)


>ENSMLUG00000015673
GTTTCACCCACAGGACGCGGTGGGTCCTCCGGGGCGAAGTTCCGGATTTCCCTGGGGCTTCCGGTAGGAGCCGTGATCAA
CTGTGCTGACAACACCGGAGCCAAAAATCTGTATATAATCTCCGTGAAGGGGATCAAGGGACGACTGAACAGACTTCCTG
CCGCCGGTGTGGGTGACATGGTGATGGCCACAGTCAAAAAAGGCAAACCGGAGCTCAGAAAGAAGGTACATCCAGCGGTG
GTAATTCGACAACGAAAGTCATACCGGAGAAAAGATGGCGTGTTTCTGTATTTTGAGGATAATGCGGGGGTCATAGTAAA
CAATAAAGGGGAAATGAAAGGTTCGGCCATCACAGGACCAGTTGCAAAAGAGTGTGCAGACTTGTGGCCCAGGATTGCAT
CCAATGCTGGCAGCATTGCATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004268 possible_ortholog 6 retrogenes
retro_amel_1791, retro_amel_226, retro_amel_308, retro_amel_880, retro_amel_918, retro_amel_990,
Callithrix jacchus ENSCJAG00000008311 possible_ortholog 9 retrogenes
retro_cjac_1129, retro_cjac_1483, retro_cjac_2283, retro_cjac_2598, retro_cjac_2639, retro_cjac_2772, retro_cjac_2885, retro_cjac_3128, retro_cjac_3831,
Latimeria chalumnae ENSLACG00000004430 ortholog_many2many 1 retrogene
retro_lcha_16,
Macaca mulatta ENSMMUG00000004502 possible_ortholog 9 retrogenes
retro_mmul_1598, retro_mmul_1705, retro_mmul_1955, retro_mmul_2366, retro_mmul_2391, retro_mmul_384, retro_mmul_928, retro_mmul_930, retro_mmul_935,
Nomascus leucogenys ENSNLEG00000000642 possible_ortholog 7 retrogenes
retro_nleu_1506, retro_nleu_181, retro_nleu_2056, retro_nleu_2337, retro_nleu_2988, retro_nleu_574, retro_nleu_8,
Oryctolagus cuniculus ENSOCUG00000013915 possible_ortholog 6 retrogenes
retro_ocun_1027, retro_ocun_1196, retro_ocun_1270, retro_ocun_1919, retro_ocun_251, retro_ocun_482,
Ochotona princeps ENSOPRG00000001957 possible_ortholog 10 retrogenes
retro_opri_1079, retro_opri_1216, retro_opri_137, retro_opri_14, retro_opri_178, retro_opri_202, retro_opri_224, retro_opri_481, retro_opri_639, retro_opri_684,
Pteropus vampyrus ENSPVAG00000002277 possible_ortholog 2 retrogenes
retro_pvam_488, retro_pvam_890,
Rattus norvegicus ENSRNOG00000004107 possible_ortholog 10 retrogenes
retro_rnor_1195, retro_rnor_1539, retro_rnor_1622, retro_rnor_2445, retro_rnor_2483, retro_rnor_2688, retro_rnor_2981, retro_rnor_347, retro_rnor_498, retro_rnor_941,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_184 88.97 97.14
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2. retro_mluc_447 72.99 95.71
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3. retro_mluc_560 69.05 59.29
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4. retro_mluc_1262 72.07 77.86
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5. retro_mluc_1523 81.30 87.14
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6. retro_mluc_1598 89.36 100.00
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7. retro_mluc_1792 72.00 70.00
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8. retro_mluc_2051 83.97 92.14
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9. retro_mluc_2410 77.17 65.00
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Download FASTA sequences of all ENSMLUG00000015673 retrocopies