Parental gene: | LIMS2, ENSMMUG00000004179 |
| Aliases: | None |
| Description: | LIM and senescent cell antigen-like-containing domain protein 2 [Source:RefSeq peptide;Acc:NP_001252623] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 13:134098369..134142606(-) |
>ENSMMUG00000004179
ATGTCGGACGCCTTGGCCAATGCCGTGTGCCAGCGTTGCCAGGCCCGCTTCGCCCCCGCTGAGCGCATTGTCAACAGCAA
TGGGGAGCTGTACCATGAGCACTGCTTCGTGTGTGCCCAGTGCTTCCGGCCCTTCCCCGAGGGGCTCTTCTATGAGTTTG
AAGGCCGGAAGTACTGTGAACACGACTTCCAAATGCTGTTTGCTCCGTGCTGCGGATCCTGCGGCGAGTTCATCATTGGC
CGCGTCATCAAGGCTATGAACAACAACTGGCACCCGGGCTGCTTCCGCTGCGAGCTGTGCGATGTGGAGCTGGCTGACCT
GGGCTTCGTGAAGAATGCCAGCAGGCATCTCTGCCGGCCTTGCCACAACCGTGAGAAGGCCAAGGGCCTGGGCAAGTACA
TCTGCCAGCGGTGCCACCTGGTCATCGACGAGCAGCCCCTCATGTTCAGGAGCGACGCCTACCACCCTGACCACTTCAAC
TGCACGCACTGTGGGAAGGAGCTGACGGCTGAGGCCCGTGAGCTGAAGGGCGAGCTCTACTGCCTGCCCTGCCATGACAA
GATGGGCGTCCCCATCTGCGGTGCCTGCCGCCGGCCCATTGAGGGCCGAGTGGTCAACGCGCTGGGCAAGCAGTGGCACG
TGGAGCACTTCGTCTGCGCCAAGTGTGAGAAGCCATTTCTGGGGCACCGGCACTATGAGAAGAAGGGCCTGGCCTACTGT
GAGACTCACTACAACCAGCTCTTCGGGGACGTCTGCTACAACTGCAGCCATGTGATTGAAGGCGATGTGGTGTCGGCCCT
CAACAAGGCCTGGTGTGTGAGTTGCTTCTCCTGCTCCACCTGCAACAGCAAGCTCACCCTGAAGAACAAGTTTGTGGAGT
TTGACATGAAGCCCGTGTGTAAAAGGTGCTATGAGAAGTTCCCACTGGAGCTGAAGAAGCGGCTGAAGAAGCTGTCGGAG
CTGACCTCCCGCCCCAGCCCAAGGCCGCGGACCTCAACTCTGCCTGAAGGGCCTCTTGCACGGCTCTCGGGCCCTCTGCC
TTCTCCCCTCCCGCTGTCCCTGCTCAGCCCCCTCGGCCCGGTCCACCTGCGCCTTCCGCACCTTACCCTCCCCTTCTCCT
TCCTCATTGCCTCCTCCCTTCCTGTTCCCTCATCTCTGCCTTCCCCATGTCTCTCTTCTCCTTGGCTGTGGCTTCCCTCT
GTGAGGAGGCAGGAGCTAGGGAGTGGGAGCCTGTGA
ATGTCGGACGCCTTGGCCAATGCCGTGTGCCAGCGTTGCCAGGCCCGCTTCGCCCCCGCTGAGCGCATTGTCAACAGCAA
TGGGGAGCTGTACCATGAGCACTGCTTCGTGTGTGCCCAGTGCTTCCGGCCCTTCCCCGAGGGGCTCTTCTATGAGTTTG
AAGGCCGGAAGTACTGTGAACACGACTTCCAAATGCTGTTTGCTCCGTGCTGCGGATCCTGCGGCGAGTTCATCATTGGC
CGCGTCATCAAGGCTATGAACAACAACTGGCACCCGGGCTGCTTCCGCTGCGAGCTGTGCGATGTGGAGCTGGCTGACCT
GGGCTTCGTGAAGAATGCCAGCAGGCATCTCTGCCGGCCTTGCCACAACCGTGAGAAGGCCAAGGGCCTGGGCAAGTACA
TCTGCCAGCGGTGCCACCTGGTCATCGACGAGCAGCCCCTCATGTTCAGGAGCGACGCCTACCACCCTGACCACTTCAAC
TGCACGCACTGTGGGAAGGAGCTGACGGCTGAGGCCCGTGAGCTGAAGGGCGAGCTCTACTGCCTGCCCTGCCATGACAA
GATGGGCGTCCCCATCTGCGGTGCCTGCCGCCGGCCCATTGAGGGCCGAGTGGTCAACGCGCTGGGCAAGCAGTGGCACG
TGGAGCACTTCGTCTGCGCCAAGTGTGAGAAGCCATTTCTGGGGCACCGGCACTATGAGAAGAAGGGCCTGGCCTACTGT
GAGACTCACTACAACCAGCTCTTCGGGGACGTCTGCTACAACTGCAGCCATGTGATTGAAGGCGATGTGGTGTCGGCCCT
CAACAAGGCCTGGTGTGTGAGTTGCTTCTCCTGCTCCACCTGCAACAGCAAGCTCACCCTGAAGAACAAGTTTGTGGAGT
TTGACATGAAGCCCGTGTGTAAAAGGTGCTATGAGAAGTTCCCACTGGAGCTGAAGAAGCGGCTGAAGAAGCTGTCGGAG
CTGACCTCCCGCCCCAGCCCAAGGCCGCGGACCTCAACTCTGCCTGAAGGGCCTCTTGCACGGCTCTCGGGCCCTCTGCC
TTCTCCCCTCCCGCTGTCCCTGCTCAGCCCCCTCGGCCCGGTCCACCTGCGCCTTCCGCACCTTACCCTCCCCTTCTCCT
TCCTCATTGCCTCCTCCCTTCCTGTTCCCTCATCTCTGCCTTCCCCATGTCTCTCTTCTCCTTGGCTGTGGCTTCCCTCT
GTGAGGAGGCAGGAGCTAGGGAGTGGGAGCCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .49 RPM |
| SRP007412_brain | 6 .61 RPM |
| SRP007412_cerebellum | 2 .78 RPM |
| SRP007412_heart | 105 .52 RPM |
| SRP007412_kidney | 15 .38 RPM |
| SRP007412_liver | 37 .41 RPM |
| SRP007412_testis | 4 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000003146 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007922 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1939 | 59.73 | 94.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000004179 retrocopies