Parental gene: | PTPN4, ENSMMUG00000005610 |
| Aliases: | None |
| Description: | tyrosine-protein phosphatase non-receptor type 4 [Source:RefSeq peptide;Acc:NP_001253553] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 13:125948757..126175790(+) |
>ENSMMUG00000005610
ATGACCTCACGTTTCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCCGAGACAGACAGCATAC
AGAAGTGGTTTGCAACATCCTTCTTCTGGATAACACTGTACAAGCTTTCAAAGTCAATAAACATGATCAGGGGCAAGTCT
TGTTGGATATAGTCTTCAAGCATCTTGATTTGACTGAGCAGGACTATTTTGGTTTACAGTTGGCTGATGATTCCACAGAT
AACCCAAGGTGGCTGGATCCAAACAAACCAATAAGGAAGCAGCTAAAGAGAGGATCTCCTTACAATTTGAACTTTAGAGT
CAAATTTTTTGTAAGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTACCAGTATTTTTTGCAAATTAAACAAGACA
TTCTTACTGGAAGATTACCCTGTCCTTCTAATACTGCTGCCCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAGAC
TACGATCAGTCAGAGAACTTGTCAGGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACCTCAAGATTTTGAAAAAGA
AATTGCAAAATTACATCAGCAACACATAGGCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAACACAGCACGTACCT
TAGAACTCTATGGAGTTGAATTCCACTATGCAAGGGATCAGAGTAACAATGAAATTATGATTGGAGTGATGTCAGGAGGA
ATTCTGATTTATAAGAACAGGGTACGAATGAATACCTTTCCATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAACA
GTTTTTTATTCAACTTAGAAAAGAATTGCATGAATCTAGAGAAACATTATTGGGATTTAATATGGTGAATTACAGAGCAT
GTAAAAATTTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAAAGAATTTT
TTTGCACATTATTTTACATTAGGTTCAAAATTCCGGTACTGTGGGAGAACTGAAGTCCAGTCAGTTCAGTATGGCAAAGA
AAAGGCAAATAAAGACAGGGTATTTGCAAGATCCCCAAGTAAGCCCTTGGCACGGAAATTAATGGATTGGGAAGTAGTAA
GCAGAAATTCAATATCTGATGACAGGTTAGAAACACAAAGCCTTCCATCACGATCTCCACCGGGAACTCCTAATCATCGA
AATTCTGCATTCACGCAGGAAGGAACCCGGTTACGACCATCTTCAGTTGGTCATTTGGTAGACCATATGGTTCATACTTC
CCCAAGCGAAGTGTTTGTGAATCAGAGATCTCCGTCATCAACACAAGCTAATAGCATTGTTCTGGAATCATCACCATCAC
AAGAGACACCTGGAGATGGGAAGCCTCCAGCTTTACCACCCAAACAATCAAAGAAAAACAGTTGGAACCAAATTCATTAT
TCACACTCGCAACAAGATCTAGAAAGTCATATTAATGAAACATTTGATATTCCATCTTCTCCTGAAAAGCCCACTCCTAA
TGGTGGTATTCCACATGATAATCTTGTCCTAATCAGAATGAAACCTGATGAAAATGGAAGGTTTGGATTCAATGTAAAGG
GAGGATATGATCAGAAGATGCCTGTGATTGTGTCTCGAGTAGCACCAGGAACACCTGCTGACCTCTGTGTCCCTAGATTG
AATGAAGGGGACCAAGTTGTACTGATCAATGGTCGGGACATTGCAGAACACACTCATGATCAGGTTGTGCTGTTTATTAA
AGCTAGTTGTGAGAGACATTCTGGGGAACTCATGCTTCTAGTTCGACCTAATGCTGTATATGATGTAGTGGAAGAAAAGC
TAGAAAATGAGCCAGATTTCCAGTATATTCCTGAGAAAGCCTCACTAGATAGTGTGCATCAGGATGACCATTCCCTGCGG
GAGTCAATGATCCAGCTAGCTGAGGGGCTTATCACTGGAACAGTCCTGACACAGTTTGATCAACTTTATCGGAAAAAACC
TGGAATGACAATGTCTTGTGCCAAATTACCTCAGAATATTTCCAAAAATAGATACAGAGATATTTCGCCTTATGATGCCA
CACGGGTCATTTTAAAAGGTAATGAAGACTACATCAATGCGAACTATATAAATATGGAAATCCCTTCTTCCAGCATTATA
AATCAGTACATTGCTTGTCAAGGGCCATTACCACACACTTGTACAGATTTTTGGCAGATGACTTGGGAACAAGGCTCCTC
TATGGTTGTAATGTTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCACCAATATTGGCCAGAACCCACAGGCAGTT
CATCTTATGGATGCTACCAAGTTACCTGCCACTCTGAGGAAGGAAACACTGCCTATATCTTCAGGAAGATGACACTGTTT
AACCAAGAGAAAAATGAAAGTCGTCCACTCACTCAGATCCAGTACATAGCCTGGCCTGACCATGGAGTCCCTGATGATTC
GAGTGACTTTCTAGATTTTGTTTGTCATGTACGAAACAAGAGGGCTGGCAAGGAAGAACCTGTTGTTGTCCATTGCAGTG
CTGGAATCGGAAGAACTGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATTGAATGCAATCAGCCAGTTTATCCA
CTAGATATTGTAAGAACAATGAGAGATCAACGAGCCATGATGATCCAAACACCTAGTCAATACAGATTTGTATGTGAAGC
TATTTTGAAAGTTTATGAAGAAGGCTTTGTTAAACCCTTAACAACATCATCAAATAAATAA
ATGACCTCACGTTTCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCCGAGACAGACAGCATAC
AGAAGTGGTTTGCAACATCCTTCTTCTGGATAACACTGTACAAGCTTTCAAAGTCAATAAACATGATCAGGGGCAAGTCT
TGTTGGATATAGTCTTCAAGCATCTTGATTTGACTGAGCAGGACTATTTTGGTTTACAGTTGGCTGATGATTCCACAGAT
AACCCAAGGTGGCTGGATCCAAACAAACCAATAAGGAAGCAGCTAAAGAGAGGATCTCCTTACAATTTGAACTTTAGAGT
CAAATTTTTTGTAAGTGACCCCAACAAGTTACAAGAAGAATATACAAGGTACCAGTATTTTTTGCAAATTAAACAAGACA
TTCTTACTGGAAGATTACCCTGTCCTTCTAATACTGCTGCCCTTTTAGCTTCATTTGCTGTTCAGTCTGAACTTGGAGAC
TACGATCAGTCAGAGAACTTGTCAGGCTACCTCTCAGATTATTCTTTCATTCCTAATCAACCTCAAGATTTTGAAAAAGA
AATTGCAAAATTACATCAGCAACACATAGGCTTATCTCCTGCAGAAGCAGAATTTAATTACCTAAACACAGCACGTACCT
TAGAACTCTATGGAGTTGAATTCCACTATGCAAGGGATCAGAGTAACAATGAAATTATGATTGGAGTGATGTCAGGAGGA
ATTCTGATTTATAAGAACAGGGTACGAATGAATACCTTTCCATGGTTGAAGATTGTAAAAATTTCTTTTAAGTGCAAACA
GTTTTTTATTCAACTTAGAAAAGAATTGCATGAATCTAGAGAAACATTATTGGGATTTAATATGGTGAATTACAGAGCAT
GTAAAAATTTGTGGAAAGCATGTGTAGAACATCACACATTCTTCCGTTTGGACAGACCACTTCCACCTCAAAAGAATTTT
TTTGCACATTATTTTACATTAGGTTCAAAATTCCGGTACTGTGGGAGAACTGAAGTCCAGTCAGTTCAGTATGGCAAAGA
AAAGGCAAATAAAGACAGGGTATTTGCAAGATCCCCAAGTAAGCCCTTGGCACGGAAATTAATGGATTGGGAAGTAGTAA
GCAGAAATTCAATATCTGATGACAGGTTAGAAACACAAAGCCTTCCATCACGATCTCCACCGGGAACTCCTAATCATCGA
AATTCTGCATTCACGCAGGAAGGAACCCGGTTACGACCATCTTCAGTTGGTCATTTGGTAGACCATATGGTTCATACTTC
CCCAAGCGAAGTGTTTGTGAATCAGAGATCTCCGTCATCAACACAAGCTAATAGCATTGTTCTGGAATCATCACCATCAC
AAGAGACACCTGGAGATGGGAAGCCTCCAGCTTTACCACCCAAACAATCAAAGAAAAACAGTTGGAACCAAATTCATTAT
TCACACTCGCAACAAGATCTAGAAAGTCATATTAATGAAACATTTGATATTCCATCTTCTCCTGAAAAGCCCACTCCTAA
TGGTGGTATTCCACATGATAATCTTGTCCTAATCAGAATGAAACCTGATGAAAATGGAAGGTTTGGATTCAATGTAAAGG
GAGGATATGATCAGAAGATGCCTGTGATTGTGTCTCGAGTAGCACCAGGAACACCTGCTGACCTCTGTGTCCCTAGATTG
AATGAAGGGGACCAAGTTGTACTGATCAATGGTCGGGACATTGCAGAACACACTCATGATCAGGTTGTGCTGTTTATTAA
AGCTAGTTGTGAGAGACATTCTGGGGAACTCATGCTTCTAGTTCGACCTAATGCTGTATATGATGTAGTGGAAGAAAAGC
TAGAAAATGAGCCAGATTTCCAGTATATTCCTGAGAAAGCCTCACTAGATAGTGTGCATCAGGATGACCATTCCCTGCGG
GAGTCAATGATCCAGCTAGCTGAGGGGCTTATCACTGGAACAGTCCTGACACAGTTTGATCAACTTTATCGGAAAAAACC
TGGAATGACAATGTCTTGTGCCAAATTACCTCAGAATATTTCCAAAAATAGATACAGAGATATTTCGCCTTATGATGCCA
CACGGGTCATTTTAAAAGGTAATGAAGACTACATCAATGCGAACTATATAAATATGGAAATCCCTTCTTCCAGCATTATA
AATCAGTACATTGCTTGTCAAGGGCCATTACCACACACTTGTACAGATTTTTGGCAGATGACTTGGGAACAAGGCTCCTC
TATGGTTGTAATGTTGACCACACAAGTTGAACGTGGCAGAGTTAAATGTCACCAATATTGGCCAGAACCCACAGGCAGTT
CATCTTATGGATGCTACCAAGTTACCTGCCACTCTGAGGAAGGAAACACTGCCTATATCTTCAGGAAGATGACACTGTTT
AACCAAGAGAAAAATGAAAGTCGTCCACTCACTCAGATCCAGTACATAGCCTGGCCTGACCATGGAGTCCCTGATGATTC
GAGTGACTTTCTAGATTTTGTTTGTCATGTACGAAACAAGAGGGCTGGCAAGGAAGAACCTGTTGTTGTCCATTGCAGTG
CTGGAATCGGAAGAACTGGGGTTCTTATTACTATGGAAACAGCCATGTGTCTCATTGAATGCAATCAGCCAGTTTATCCA
CTAGATATTGTAAGAACAATGAGAGATCAACGAGCCATGATGATCCAAACACCTAGTCAATACAGATTTGTATGTGAAGC
TATTTTGAAAGTTTATGAAGAAGGCTTTGTTAAACCCTTAACAACATCATCAAATAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 26 .58 RPM |
| SRP007412_brain | 32 .16 RPM |
| SRP007412_cerebellum | 36 .94 RPM |
| SRP007412_heart | 4 .00 RPM |
| SRP007412_kidney | 5 .52 RPM |
| SRP007412_liver | 3 .64 RPM |
| SRP007412_testis | 17 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001015 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_2279 | 66.39 | 63.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000005610 retrocopies