Parental gene:

MMU.4582, ENSMMUG00000016239

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:96183276..96214106(-)


>ENSMMUG00000016239
ATGGCGACCGCGGCGCGTGTTGTGGGCCGGCTGCCCGCGCTGTGTAGCGGGACGGCAGGTCATTTATTGGGGAGGCAGCG
TTCCCTAAGCACCTTACCAGCAGCTTCCATTTTGGCGTGGAAGAGTGCTCTGAGCAATGGCTGTTTGTCATCACTGGGAA
CCAGAGACACCCATCCCTACGCCAGCTTGAGCCACGCGCTGCAGACACAATGCTGTGTTTCTTCTCCCAGTCACCTGATG
GGCCAGCAGTATAGACCATATAGTTTCTTCACTAAATTGACTGCAGATGAGCTGTGGAAAGGCGCTTTAGCGGAGAGTGG
TGCCGGATCAAGAAAAGGAAGAGGCAAAAGAACTAAAAAGAGGAAAAGAAAGGATCTGAACAGGGGTCAGATCATTGGTG
AAGGGCATTACGGTTTTCTGTGGCCTGGTCTGAATGTCCCTCTTATGAAAAATGGAGCAGTGCAGACCATCGCCCAAAGA
AGCAAGGAAGAGCAGAAGAAGATGGAGGCCGACATGATCCAGCAGAGAGAAGAGTGGTACCGAAAGAGGAAGATAAAGGT
TAAACACGAGCGAGGATGGACTGGAAACTCCTGGGGAGGCGTCAGTCTTGGCCCCCCTGGCCCTGGCCCCAATGGAGAAA
CATACGAGGATTTTGATACCAGGGTACTTGAGGTAAGAAATGTTTTCAATATGACAGCGAAAGAGGGAAGAAAGAAATCG
GTCCGTGTCCTGGTGGCTGTGGGGAACGGAAAAGGAGCTGCAGGTTTTGCTATTGGGAAAGCCACTGATCGGATGGACGC
TTTCAGGAAAGCAAAGAACAGAGCACTTTACTGTTTGCATTATATAGAACGATATGAAGACCATACAATATTCCATGATA
TTTCATTAAGATTTAAAAGGACGCGTATCAGGATGAAGAAACAACCCAAAGGTTATGGCCTCCGCTGCCACAGAGCCATC
ATCACCATCTGCCGGCTCATTGGCATCAAAGACATGTACGCCAAGGTCTCTGGGTCTGTTAATATGATCAACCTCACCCG
GGGCCTCTTCTATGGGCTCTCCAGACAGGTAACC

Library Parental gene expression (RPM)
SRP007412_brain 18 .04 RPM
SRP007412_brain_prefrontal_cortex 27 .21 RPM
SRP007412_cerebellum 12 .53 RPM
SRP007412_heart 37 .27 RPM
SRP007412_kidney 21 .13 RPM
SRP007412_liver 13 .02 RPM
SRP007412_testis 26 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009757 possible_ortholog 1 retrogene
retro_amel_1242,
Callithrix jacchus ENSCJAG00000018942 ortholog_one2one 1 retrogene
retro_cjac_2129,
Homo sapiens ENSG00000144029 ortholog_one2one 1 retrogene
retro_hsap_3116,
Gorilla gorilla ENSGGOG00000001750 ortholog_one2many 1 retrogene
retro_ggor_2139,
Microcebus murinus ENSMICG00000007318 ortholog_one2one 1 retrogene
retro_mmur_565,
Myotis lucifugus ENSMLUG00000003183 possible_ortholog 1 retrogene
retro_mluc_2245,
Mus musculus ENSMUSG00000027374 ortholog_one2many 1 retrogene
retro_mmus_2014,
Nomascus leucogenys ENSNLEG00000000002 ortholog_one2one 1 retrogene
retro_nleu_1438,
Pongo abelii ENSPPYG00000012051 ortholog_one2one 1 retrogene
retro_pabe_2574,
Pan troglodytes ENSPTRG00000012209 ortholog_one2one 1 retrogene
retro_ptro_2107,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2110 79.06 77.09
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2. retro_mmul_2251 97.18 59.22
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Download FASTA sequences of all ENSMMUG00000016239 retrocopies