Parental gene: | AP3M1, ENSMODG00000000660 |
| Aliases: | None |
| Description: | adaptor-related protein complex 3, mu 1 subunit [Source:HGNC Symbol;Acc:569] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:50893324..50909338(-) |
>ENSMODG00000000660
ATGATCCACAGTCTGTTCCTCATAAACTGTTCCGGTGACATCTTCCTAGAGAAGCATTGGAAGAGTGTCGTGAGCCAGTC
TGTCTGTGACTATTTCTTTGAAGCCCAGGAGAAAGCTGCTGATGTGGAAAATGTGCCACCTGTCATCTCAACACCTCACC
ACTACCTCATCAGCATCTATAGAGACAAACTCTTCTTTGTATCCGTCATACAGACAGAAGTGCCACCACTCTTTGTCATC
GAATTTCTGCATCGAGTCGCAGACACTTTTCAGGACTACTTTGGGGAGTGTTCAGAGGCTGCGATTAAGGATAATGTGGT
CATAGTATATGAACTCTTGGAAGAAATGTTAGATAATGGATTTCCCCTGGCAACTGAATCTAACATCTTGAAAGAACTGA
TTAAACCACCAACAATTCTGCGCTCTGTTGTCAATTCTATTACAGGCAGTAGTAATGTTGGAGACACACTCCCCACTGGC
CAGCTTTCCAACATCCCATGGCGTCGTGCAGGTGTGAAATACACAAACAATGAAGCTTATTTTGATGTCATTGAAGAAAT
AGATGCAATTATAGACAAATCAGGTTCCACAGTCTTTGCAGAAATTCAAGGTGTCATTGATGCTTGCATTAAGCTTTCCG
GAATGCCTGATCTTTCCCTTTCTTTCATGAACCCAAGGCTTCTAGATGATGTCAGCTTCCACCCCTGCATTCGTTTCAAA
CGCTGGGAGTCAGAAAGAGTCCTGTCATTTATTCCTCCAGATGGAAACTTCCGACTCATTTCCTACCGTGTCAGCTCACA
AAATTTAGTGGCAATTCCAGTGTATGTGAAACATAGCATCAGCTTTAAGGAGAACAGCTCTTGTGGCAGATTCGATATTA
CAATTGGACCAAAGCAAAACATGGGAAAAACAATTGAAGGAATCACAGTGACTGTTCACATGCCCAAAGTTGTATTGAAT
ATGAACCTAACTCCAACACAAGGCAGCTACACGTTTGATCCAGTCACCAAGGTCTTAACATGGGATGTTGGGAAAATTAC
CCCCCAGAAGCTCCCAAGTCTTAAAGGATTGGTGAATTTACAGTCTGGAGCCCCCAAACCGGAAGAAAACCCAAGCCTCA
ACATTCAGTTCAAGATTCAGCAACTTGCTATTTCAGGCTTGAAAGTCAATCGCCTTGATATGTATGGAGAGAAATATAAG
CCATTTAAAGGAGTCAAATATATCACAAAAGCTGGGAAGTTCCAAGTGAGGACATGA
ATGATCCACAGTCTGTTCCTCATAAACTGTTCCGGTGACATCTTCCTAGAGAAGCATTGGAAGAGTGTCGTGAGCCAGTC
TGTCTGTGACTATTTCTTTGAAGCCCAGGAGAAAGCTGCTGATGTGGAAAATGTGCCACCTGTCATCTCAACACCTCACC
ACTACCTCATCAGCATCTATAGAGACAAACTCTTCTTTGTATCCGTCATACAGACAGAAGTGCCACCACTCTTTGTCATC
GAATTTCTGCATCGAGTCGCAGACACTTTTCAGGACTACTTTGGGGAGTGTTCAGAGGCTGCGATTAAGGATAATGTGGT
CATAGTATATGAACTCTTGGAAGAAATGTTAGATAATGGATTTCCCCTGGCAACTGAATCTAACATCTTGAAAGAACTGA
TTAAACCACCAACAATTCTGCGCTCTGTTGTCAATTCTATTACAGGCAGTAGTAATGTTGGAGACACACTCCCCACTGGC
CAGCTTTCCAACATCCCATGGCGTCGTGCAGGTGTGAAATACACAAACAATGAAGCTTATTTTGATGTCATTGAAGAAAT
AGATGCAATTATAGACAAATCAGGTTCCACAGTCTTTGCAGAAATTCAAGGTGTCATTGATGCTTGCATTAAGCTTTCCG
GAATGCCTGATCTTTCCCTTTCTTTCATGAACCCAAGGCTTCTAGATGATGTCAGCTTCCACCCCTGCATTCGTTTCAAA
CGCTGGGAGTCAGAAAGAGTCCTGTCATTTATTCCTCCAGATGGAAACTTCCGACTCATTTCCTACCGTGTCAGCTCACA
AAATTTAGTGGCAATTCCAGTGTATGTGAAACATAGCATCAGCTTTAAGGAGAACAGCTCTTGTGGCAGATTCGATATTA
CAATTGGACCAAAGCAAAACATGGGAAAAACAATTGAAGGAATCACAGTGACTGTTCACATGCCCAAAGTTGTATTGAAT
ATGAACCTAACTCCAACACAAGGCAGCTACACGTTTGATCCAGTCACCAAGGTCTTAACATGGGATGTTGGGAAAATTAC
CCCCCAGAAGCTCCCAAGTCTTAAAGGATTGGTGAATTTACAGTCTGGAGCCCCCAAACCGGAAGAAAACCCAAGCCTCA
ACATTCAGTTCAAGATTCAGCAACTTGCTATTTCAGGCTTGAAAGTCAATCGCCTTGATATGTATGGAGAGAAATATAAG
CCATTTAAAGGAGTCAAATATATCACAAAAGCTGGGAAGTTCCAAGTGAGGACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 123 .85 RPM |
| SRP007412_cerebellum | 181 .51 RPM |
| SRP007412_heart | 122 .80 RPM |
| SRP007412_kidney | 330 .52 RPM |
| SRP007412_liver | 172 .70 RPM |
| SRP007412_testis | 157 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004510 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000005838 | within_species_paralog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000021824 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012881 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1564 | 89.92 | 61.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000000660 retrocopies