Parental gene: | CASP6, ENSMODG00000005948 |
| Aliases: | None |
| Description: | caspase 6, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1507] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 5:62418007..62428178(-) |
>ENSMODG00000005948
AAAAGCTTTGGTTTGTTTTTTGTTTTTGAAGGAGATGCTGAGCAGAATGCAACAGAAATAGACGCCTTCTTTAAAAGCAA
ACCCCTGGACCCAGCAGAACAGTACAAGATGGACCACAAGAGGAGAGGCGTGGCTTTGATCTTCAACCACGAGCGCTTCT
TCTGGCACCTGACCTTGCCTGAGAGACGGGGCACACGGGCCGACAGGGACAACCTGCGGCAGAGGCTCTCGGATCTGGGC
TTCGAAGTGAATTGCTTTGATGACCTCAAAGCCGAAGACCTGCTGATGACCATTCATATGGTGTCCACCTCTAGCCACAT
AGATGCCGATTGCTTCCTGTGTGTGTTCCTGACACACGGGGAAGGAAACCACATCTACGCCTACGACGCCAAAATCGATA
TCCAGAAGCTGACCGCCATGTTTAAAGGAGACAAATGCCAGACCTTGGTTGGGAAACCCAAGATATTTGTCATCCAGGCC
TGTCGAGGAGACCAGCACGATATTCCGGTCATTCCTCTGGACGTGGTCGACCATCTGTCGGACAAGGTGGACGTCAATGA
AACAGAAGTGGACGCTGCCTCCGTTTATACCCTCCCGGCTGGAGCTGACTTCCTCATGTGCTATTCAGTGGCAGAAGGTT
ATTACTCTCACCGGGAGACAGTGCATGGTTCCTGGTACATTCAGGATTTGTGTGAGATGCTGGAAAAATACGGCTCCTCC
TTAGAGTTTACGGAACTCCTTACCCTGGTGAATAGGAAAGTTTCCCAGCGCAGAGTGGACTTCTGCAAGGACCCCAACGC
CATTGGGAAAAAGCAGGTCCCTTGTTTTGCCTCCATGCTGACCAAAAAGCTCTATCTCTTTCCAAAGCCTAAG
AAAAGCTTTGGTTTGTTTTTTGTTTTTGAAGGAGATGCTGAGCAGAATGCAACAGAAATAGACGCCTTCTTTAAAAGCAA
ACCCCTGGACCCAGCAGAACAGTACAAGATGGACCACAAGAGGAGAGGCGTGGCTTTGATCTTCAACCACGAGCGCTTCT
TCTGGCACCTGACCTTGCCTGAGAGACGGGGCACACGGGCCGACAGGGACAACCTGCGGCAGAGGCTCTCGGATCTGGGC
TTCGAAGTGAATTGCTTTGATGACCTCAAAGCCGAAGACCTGCTGATGACCATTCATATGGTGTCCACCTCTAGCCACAT
AGATGCCGATTGCTTCCTGTGTGTGTTCCTGACACACGGGGAAGGAAACCACATCTACGCCTACGACGCCAAAATCGATA
TCCAGAAGCTGACCGCCATGTTTAAAGGAGACAAATGCCAGACCTTGGTTGGGAAACCCAAGATATTTGTCATCCAGGCC
TGTCGAGGAGACCAGCACGATATTCCGGTCATTCCTCTGGACGTGGTCGACCATCTGTCGGACAAGGTGGACGTCAATGA
AACAGAAGTGGACGCTGCCTCCGTTTATACCCTCCCGGCTGGAGCTGACTTCCTCATGTGCTATTCAGTGGCAGAAGGTT
ATTACTCTCACCGGGAGACAGTGCATGGTTCCTGGTACATTCAGGATTTGTGTGAGATGCTGGAAAAATACGGCTCCTCC
TTAGAGTTTACGGAACTCCTTACCCTGGTGAATAGGAAAGTTTCCCAGCGCAGAGTGGACTTCTGCAAGGACCCCAACGC
CATTGGGAAAAAGCAGGTCCCTTGTTTTGCCTCCATGCTGACCAAAAAGCTCTATCTCTTTCCAAAGCCTAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000002727 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010297 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000009840 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1854 | 98.26 | 98.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000005948 retrocopies