Parental gene: | B4GALT5, ENSMODG00000016301 |
| Aliases: | None |
| Description: | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 [Source:HGNC Symbol;Acc:928] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:496405636..496508854(+) |
>ENSMODG00000016301
ATGCGGAGCCGGCGGGGGCTGCGGCTCCCGCGCCGCTCGCTGCTCGCCGCGCTCTTCTTCTTCTCGCTGTCCTCAACCTT
TCTCTACTTCGTGTATGTGGCGCCCGGCATAGTGAATACCTACCTCTTCATGATGCAAGCCCAAGGCATCCTTATCCGAG
ACAACATGAGAACAATAGGAGCTCAGGTGTATGAGCAGGTGGTTCGGAGTGCGTATGCCAGGAGGAATAGCAGTGTAAAT
GACTCAGATTATCCTCTTGACTTGAATCATAGTGAAACCTTCCTGCAAACCACAACTTTTCTTCCTGAAGACTTTACATA
CTTTGCAAACCATACCTGCCCTGAAAGACTCCCTTCTATGAAGGGTCCAATAGATATAAATATGAGTGAAATCAGAATGG
ATGACATCCATGAATTCTTCTCTAGAGACCCTGCCATCAAGCTTGGAGGTCATTGGAAGCCCAGTGATTGCATGCCTCGT
TGGAAGGTGGCAATTCTTATTCCATTTCGAAACCGTTATGAGCATCTCCCTGTTCTTTTCCGGCATCTGATTCCTATGCT
ACAACGCCAGCGTCTACAGTTTGCATTCTATGTTATTGAACAAGCCGGTACCCAACCCTTCAATCGTGCCATGCTCTTTA
ATGTTGGCTTTCGTGAAGCAATGAGAGACTTGCATTGGGATTGTTTGATTTTTCACGATGTGGATCATATACCAGAAAAT
GACCGTAACTATTATGGATGTGGGCAAATGCCAAGACATTTTGCCACCAAGCTGGATAAGTATATGTATCTGCTTCCTTA
TAATGAGTTTTTTGGTGGAGTGAGCGGCTTAACAGTAGAGCAGTTTCAGAAAATTAATGGCTTTCCTAATGCATTCTGGG
GCTGGGGTGGAGAAGATGATGACCTCTGGAACAGAGTACAGAATGCAGGCTACTCAGTGAGCCGACCAGAAGGTGACACT
GGAAAGTATAAATCTATCCCTCACCACCATCGAGGAGAAGTGCAGTTTTTAGGGAGGTATGCACTACTGAGGAAATCAAA
GGAAAGACAGGCTCTGGATGGCCTCAATAACTTGAACTACTTTGCAAACATCACATATGACGCCTTGTATAAAAATATAA
CTGTAAACTTGACACCAGAGCTGGCTCAGGTGAATGAATATTAA
ATGCGGAGCCGGCGGGGGCTGCGGCTCCCGCGCCGCTCGCTGCTCGCCGCGCTCTTCTTCTTCTCGCTGTCCTCAACCTT
TCTCTACTTCGTGTATGTGGCGCCCGGCATAGTGAATACCTACCTCTTCATGATGCAAGCCCAAGGCATCCTTATCCGAG
ACAACATGAGAACAATAGGAGCTCAGGTGTATGAGCAGGTGGTTCGGAGTGCGTATGCCAGGAGGAATAGCAGTGTAAAT
GACTCAGATTATCCTCTTGACTTGAATCATAGTGAAACCTTCCTGCAAACCACAACTTTTCTTCCTGAAGACTTTACATA
CTTTGCAAACCATACCTGCCCTGAAAGACTCCCTTCTATGAAGGGTCCAATAGATATAAATATGAGTGAAATCAGAATGG
ATGACATCCATGAATTCTTCTCTAGAGACCCTGCCATCAAGCTTGGAGGTCATTGGAAGCCCAGTGATTGCATGCCTCGT
TGGAAGGTGGCAATTCTTATTCCATTTCGAAACCGTTATGAGCATCTCCCTGTTCTTTTCCGGCATCTGATTCCTATGCT
ACAACGCCAGCGTCTACAGTTTGCATTCTATGTTATTGAACAAGCCGGTACCCAACCCTTCAATCGTGCCATGCTCTTTA
ATGTTGGCTTTCGTGAAGCAATGAGAGACTTGCATTGGGATTGTTTGATTTTTCACGATGTGGATCATATACCAGAAAAT
GACCGTAACTATTATGGATGTGGGCAAATGCCAAGACATTTTGCCACCAAGCTGGATAAGTATATGTATCTGCTTCCTTA
TAATGAGTTTTTTGGTGGAGTGAGCGGCTTAACAGTAGAGCAGTTTCAGAAAATTAATGGCTTTCCTAATGCATTCTGGG
GCTGGGGTGGAGAAGATGATGACCTCTGGAACAGAGTACAGAATGCAGGCTACTCAGTGAGCCGACCAGAAGGTGACACT
GGAAAGTATAAATCTATCCCTCACCACCATCGAGGAGAAGTGCAGTTTTTAGGGAGGTATGCACTACTGAGGAAATCAAA
GGAAAGACAGGCTCTGGATGGCCTCAATAACTTGAACTACTTTGCAAACATCACATATGACGCCTTGTATAAAAATATAA
CTGTAAACTTGACACCAGAGCTGGCTCAGGTGAATGAATATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 228 .26 RPM |
| SRP007412_cerebellum | 133 .52 RPM |
| SRP007412_heart | 66 .58 RPM |
| SRP007412_kidney | 133 .00 RPM |
| SRP007412_liver | 67 .47 RPM |
| SRP007412_testis | 147 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tetraodon nigroviridis | ENSTNIG00000010472 | ortholog_many2many | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000005726 | ortholog_many2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004300 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1782 | 90.08 | 67.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000016301 retrocopies