Parental gene: | CTSZ, ENSMODG00000016601 |
| Aliases: | None |
| Description: | cathepsin Z [Source:HGNC Symbol;Acc:2547] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:483828936..483834940(+) |
>ENSMODG00000016601
ATGGCTCCGCCTCGGGGGCTGCTGACGCTGCAGCTGCAGCTGCTTCTCCTGGTTCTCTGGGGCTGCTGGAGCCCGAGCTC
CGCGGGTATCTACTACCAGAAGGGCCAGAGCTGCTATCGGCCGCTGGAGGGGTTCCAGTCCCGGGAGCACAGGACCTATC
CCAGACCCCATGAATACATGGCTCGCTCTAGTCTGCCCAAAGCCTGGGACTGGCGCAACGTGAACGGGGTCAACTATGCC
AGCATCACCCGGAACCAGCACATCCCCCAGTACTGCGGCTCCTGCTGGGCCCACGGCACCACCAGCGCCCTGGCAGATCG
TATCAATATCAAGAGGAAGGGAGCCTGGCCCTCTACGCTCCTGTCTGTGCAACACGTGATTGACTGTGGCAATGCTGGGT
CCTGTGAGGGTGGCATGGATATCCCTGTGTGGGAATACGCTCACATGCATGGCATTCCCGATGAGACCTGCAACAACTAC
CAGGCCAAAGACCAGGAATGTGACAAGTTTAATGAATGTGGCACATGTAATGAATTCCATAATTGCTATTCTATAAAGAA
CTATACTCTCTGGAAAGTTGGAGACTATGGTACCCTTTCTGGAAGAGAAAAAATGATGGCAGAAATCTATGCAAATGGGC
CTATCAGTTGTGGCATAATGGCAACGGAAGCCTTGGATAACTACACTGGAGGGATCTATTTTGAATATAATCCTCAACCT
ATGATAAACCATATCATTTCTGTGGCAGGGTGGGGTGTTAGTGATAACGGAACAGAATACTGGATTGTCCGAAATTCATG
GGGTGAACCCTGGGGTGAAAAGGGCTGGCTGAGGATTGTAACCAGCAGATATAAAGATGGACAGGGCAGTAATTACAATC
TTGCTATTGAAGAAACGTGTTCATTTGGAGATCCCATAGTTTAA
ATGGCTCCGCCTCGGGGGCTGCTGACGCTGCAGCTGCAGCTGCTTCTCCTGGTTCTCTGGGGCTGCTGGAGCCCGAGCTC
CGCGGGTATCTACTACCAGAAGGGCCAGAGCTGCTATCGGCCGCTGGAGGGGTTCCAGTCCCGGGAGCACAGGACCTATC
CCAGACCCCATGAATACATGGCTCGCTCTAGTCTGCCCAAAGCCTGGGACTGGCGCAACGTGAACGGGGTCAACTATGCC
AGCATCACCCGGAACCAGCACATCCCCCAGTACTGCGGCTCCTGCTGGGCCCACGGCACCACCAGCGCCCTGGCAGATCG
TATCAATATCAAGAGGAAGGGAGCCTGGCCCTCTACGCTCCTGTCTGTGCAACACGTGATTGACTGTGGCAATGCTGGGT
CCTGTGAGGGTGGCATGGATATCCCTGTGTGGGAATACGCTCACATGCATGGCATTCCCGATGAGACCTGCAACAACTAC
CAGGCCAAAGACCAGGAATGTGACAAGTTTAATGAATGTGGCACATGTAATGAATTCCATAATTGCTATTCTATAAAGAA
CTATACTCTCTGGAAAGTTGGAGACTATGGTACCCTTTCTGGAAGAGAAAAAATGATGGCAGAAATCTATGCAAATGGGC
CTATCAGTTGTGGCATAATGGCAACGGAAGCCTTGGATAACTACACTGGAGGGATCTATTTTGAATATAATCCTCAACCT
ATGATAAACCATATCATTTCTGTGGCAGGGTGGGGTGTTAGTGATAACGGAACAGAATACTGGATTGTCCGAAATTCATG
GGGTGAACCCTGGGGTGAAAAGGGCTGGCTGAGGATTGTAACCAGCAGATATAAAGATGGACAGGGCAGTAATTACAATC
TTGCTATTGAAGAAACGTGTTCATTTGGAGATCCCATAGTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 15 .85 RPM |
| SRP007412_cerebellum | 9 .47 RPM |
| SRP007412_heart | 24 .92 RPM |
| SRP007412_kidney | 31 .60 RPM |
| SRP007412_liver | 295 .55 RPM |
| SRP007412_testis | 8 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000012612 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000000845 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002844 | other_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012029 | other_paralog | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1021 | 93.31 | 92.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000016601 retrocopies