Parental gene: | Psmd2, ENSMUSG00000006998 |
| Aliases: | Psmd2, 9430095H01Rik, AA407121, TEG-190, Tex190 |
| Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 [Source:MGI Symbol;Acc:MGI:1096584] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 16:20651651..20663414(+) |
>ENSMUSG00000006998
ATGGAGGAGGGTGGACGAGACAAGACACCCGTGCAGTCCCAACAGCCCTCCGCGACAACCCCCAGCGGCGCGGACGAGAA
GTCGAGTGGCAAGGAGCGAAGGGATGCCGGGGAAAAAGACAAAGAGCAGGAGCTGTCTGAGGAGGACAAACAGCTTCAAG
ATGAACTGGAGATGCTCGTGGAGCGACTCGGGGAGAAAGATACATCTCTATATCGACCAGCTCTGGAGGAACTGAGAAGA
CAAATTCGTTCTTCTACAACTTCCATGACTTCAGTACCCAAGCCTCTCAAATTTCTGCGTCCACACTATGGCAAATTGAA
GGAAATCTATGAGAACATGGCCCCTGGGGAGAATAAGTGTTTTGCAGCTGACATCATCTCTGTTTTGGCCATGACCATGA
GTGGTGAGCGGGAGTGCCTCAAGTATCGGCTCGTGGGCTCCCAGGAAGAACTGGCGTCATGGGGCCATGAATACGTCAGA
CATCTGGCAGGAGAGGTGGCCAAGGAGTGGCAGGAGCTGGATGATGCAGAGAAAGCACAGCGGGAACCACTGCTTACCTT
GGTAAAGGAAATCGTCCCCTACAACATGGCTCACAATGCAGAGCACGAGGCTTGTGACCTGCTCATGGAAATTGAGCAGG
TGGACATGCTAGAGAAGGACATTGATGAGAACGCCTACGCCAAGGTCTGCCTCTATCTCACCAGTTGTGTGAATTATGTA
CCAGAACCTGAGAACTCTGCCCTCCTGCGCTGCGCCTTGGGCGTGTTCCGAAAGTTTAGCCGTTTCCCTGAAGCTCTGAG
ATTGGCACTGATGCTCAATGACATGGAACTGGTAGAAGACATTTTCACTTCCTGCAAAGATGTGGTGGTCCAGAAGCAGA
TGGCATTCATGCTGGGTCGGCATGGAGTGTTCCTGGAGCTGAGTGAAGATGTAGAGGAATATGAAGACCTCACAGAAATC
ATGTCCAATGTCCAGCTCAACAGCAACTTCTTGGCTTTAGCTCGGGAGCTGGACATCATGGAGCCCAAGGTGCCTGATGA
CATCTACAAAACCCACCTAGAGAATAACAGGTTTGGTGGCAGTGGCTCTCAAGTGGATTCTGCACGAATGAACCTAGCCT
CCTCTTTTGTAAATGGCTTTGTGAATGCAGCCTTTGGTCAAGATAAACTACTGACTGATGATGGCAACAAATGGCTTTAC
AAGAACAAGGACCATGGGATGCTAAGTGCTGCTGCGTCTCTTGGCATGATTCTGCTGTGGGATGTGGATGGTGGCCTCAC
CCAGATTGACAAGTATCTGTACTCCTCTGAGGACTACATCAAGTCAGGAGCTCTCCTTGCCTGTGGTATCGTGAATTCTG
GAGTCCGGAATGAGTGTGATCCTGCCCTGGCACTGCTTTCAGACTATGTTCTCCATAACAGCAATACCATGAGACTTGGC
TCCATCTTTGGGCTAGGTTTGGCCTATGCTGGCTCTAATCGGGAAGATGTTCTAACACTGCTGCTACCTGTAATGGGAGA
TTCCAAGTCCAGCATGGAGGTGGCAGGTGTGACGGCTCTAGCTTGTGGGATGATAGCAGTGGGGTCCTGCAATGGAGATG
TCACTTCCACCATCCTTCAGACCATCATGGAGAAATCTGAGACTGAGCTCAAGGATACCTATGCTCGTTGGCTTCCTCTT
GGCCTGGGCCTCAATCACTTGGGGAAAGGCGAAGCTATTGAGGCCATCCTGGCTGCCTTGGAGGTGGTGTCAGAGCCATT
CCGCAGTTTTGCCAATACCCTGGTGGATGTATGTGCCTATGCAGGCTCTGGGAATGTGCTGAAGGTTCAGCAGCTCCTCC
ACATCTGTAGTGAGCACTTTGACTCTAAGGAAAAGGAGGAAGACAAAGACAAGAAGGAAAAGAAGGACAAGGACAAGAAG
GAAGCCCCTGCTGACATGGGAGCACATCAGGGAGTAGCTGTTCTGGGCATTGCACTTATTGCTATGGGGGAAGAGATTGG
TGCAGAGATGGCATTGCGAACTTTTGGTCACTTGCTGAGATATGGGGAGCCTACCCTCCGTCGCGCTGTACCTTTAGCAC
TGGCACTAATTTCTGTTTCAAATCCACGACTCAACATCCTGGATACGCTAAGCAAATTCTCTCATGATGCTGATCCAGAA
GTTTCCTATAACTCCATCTTTGCTATGGGCATGGTGGGCAGTGGTACCAATAATGCCCGTCTGGCTGCAATGTTGCGCCA
GTTAGCTCAATATCATGCCAAGGACCCCAATAACCTCTTCATGGTGCGCTTGGCACAGGGCTTGACACATTTAGGGAAGG
GCACACTTACCCTCTGCCCCTATCACAGTGATCGGCAGCTCATGAGTCAAGTAGCGGTGGCAGGGCTACTCACGGTGCTT
GTTTCTTTCCTGGATGTTCGAAACATCATCCTAGGCAAGTCTCACTATGTCCTGTATGGGCTGGTAGCCGCCATGCAGCC
TCGGATGCTGGTTACATTTGATGAGGAGCTGCGACCATTGCCAGTTTCTGTCCGTGTGGGTCAGGCAGTGGATGTGGTGG
GCCAGGCTGGGAAGCCAAAAACAATCACAGGGTTCCAGACTCATACAACGCCAGTGTTGCTGGCCCATGGGGAGCGGGCA
GAGTTGGCCACTGAGGAGTTTCTTCCTGTCACCCCCATTCTGGAAGGCTTTGTTATTCTTCGGAAGAACCCCAACTATGA
TCTTTGA
ATGGAGGAGGGTGGACGAGACAAGACACCCGTGCAGTCCCAACAGCCCTCCGCGACAACCCCCAGCGGCGCGGACGAGAA
GTCGAGTGGCAAGGAGCGAAGGGATGCCGGGGAAAAAGACAAAGAGCAGGAGCTGTCTGAGGAGGACAAACAGCTTCAAG
ATGAACTGGAGATGCTCGTGGAGCGACTCGGGGAGAAAGATACATCTCTATATCGACCAGCTCTGGAGGAACTGAGAAGA
CAAATTCGTTCTTCTACAACTTCCATGACTTCAGTACCCAAGCCTCTCAAATTTCTGCGTCCACACTATGGCAAATTGAA
GGAAATCTATGAGAACATGGCCCCTGGGGAGAATAAGTGTTTTGCAGCTGACATCATCTCTGTTTTGGCCATGACCATGA
GTGGTGAGCGGGAGTGCCTCAAGTATCGGCTCGTGGGCTCCCAGGAAGAACTGGCGTCATGGGGCCATGAATACGTCAGA
CATCTGGCAGGAGAGGTGGCCAAGGAGTGGCAGGAGCTGGATGATGCAGAGAAAGCACAGCGGGAACCACTGCTTACCTT
GGTAAAGGAAATCGTCCCCTACAACATGGCTCACAATGCAGAGCACGAGGCTTGTGACCTGCTCATGGAAATTGAGCAGG
TGGACATGCTAGAGAAGGACATTGATGAGAACGCCTACGCCAAGGTCTGCCTCTATCTCACCAGTTGTGTGAATTATGTA
CCAGAACCTGAGAACTCTGCCCTCCTGCGCTGCGCCTTGGGCGTGTTCCGAAAGTTTAGCCGTTTCCCTGAAGCTCTGAG
ATTGGCACTGATGCTCAATGACATGGAACTGGTAGAAGACATTTTCACTTCCTGCAAAGATGTGGTGGTCCAGAAGCAGA
TGGCATTCATGCTGGGTCGGCATGGAGTGTTCCTGGAGCTGAGTGAAGATGTAGAGGAATATGAAGACCTCACAGAAATC
ATGTCCAATGTCCAGCTCAACAGCAACTTCTTGGCTTTAGCTCGGGAGCTGGACATCATGGAGCCCAAGGTGCCTGATGA
CATCTACAAAACCCACCTAGAGAATAACAGGTTTGGTGGCAGTGGCTCTCAAGTGGATTCTGCACGAATGAACCTAGCCT
CCTCTTTTGTAAATGGCTTTGTGAATGCAGCCTTTGGTCAAGATAAACTACTGACTGATGATGGCAACAAATGGCTTTAC
AAGAACAAGGACCATGGGATGCTAAGTGCTGCTGCGTCTCTTGGCATGATTCTGCTGTGGGATGTGGATGGTGGCCTCAC
CCAGATTGACAAGTATCTGTACTCCTCTGAGGACTACATCAAGTCAGGAGCTCTCCTTGCCTGTGGTATCGTGAATTCTG
GAGTCCGGAATGAGTGTGATCCTGCCCTGGCACTGCTTTCAGACTATGTTCTCCATAACAGCAATACCATGAGACTTGGC
TCCATCTTTGGGCTAGGTTTGGCCTATGCTGGCTCTAATCGGGAAGATGTTCTAACACTGCTGCTACCTGTAATGGGAGA
TTCCAAGTCCAGCATGGAGGTGGCAGGTGTGACGGCTCTAGCTTGTGGGATGATAGCAGTGGGGTCCTGCAATGGAGATG
TCACTTCCACCATCCTTCAGACCATCATGGAGAAATCTGAGACTGAGCTCAAGGATACCTATGCTCGTTGGCTTCCTCTT
GGCCTGGGCCTCAATCACTTGGGGAAAGGCGAAGCTATTGAGGCCATCCTGGCTGCCTTGGAGGTGGTGTCAGAGCCATT
CCGCAGTTTTGCCAATACCCTGGTGGATGTATGTGCCTATGCAGGCTCTGGGAATGTGCTGAAGGTTCAGCAGCTCCTCC
ACATCTGTAGTGAGCACTTTGACTCTAAGGAAAAGGAGGAAGACAAAGACAAGAAGGAAAAGAAGGACAAGGACAAGAAG
GAAGCCCCTGCTGACATGGGAGCACATCAGGGAGTAGCTGTTCTGGGCATTGCACTTATTGCTATGGGGGAAGAGATTGG
TGCAGAGATGGCATTGCGAACTTTTGGTCACTTGCTGAGATATGGGGAGCCTACCCTCCGTCGCGCTGTACCTTTAGCAC
TGGCACTAATTTCTGTTTCAAATCCACGACTCAACATCCTGGATACGCTAAGCAAATTCTCTCATGATGCTGATCCAGAA
GTTTCCTATAACTCCATCTTTGCTATGGGCATGGTGGGCAGTGGTACCAATAATGCCCGTCTGGCTGCAATGTTGCGCCA
GTTAGCTCAATATCATGCCAAGGACCCCAATAACCTCTTCATGGTGCGCTTGGCACAGGGCTTGACACATTTAGGGAAGG
GCACACTTACCCTCTGCCCCTATCACAGTGATCGGCAGCTCATGAGTCAAGTAGCGGTGGCAGGGCTACTCACGGTGCTT
GTTTCTTTCCTGGATGTTCGAAACATCATCCTAGGCAAGTCTCACTATGTCCTGTATGGGCTGGTAGCCGCCATGCAGCC
TCGGATGCTGGTTACATTTGATGAGGAGCTGCGACCATTGCCAGTTTCTGTCCGTGTGGGTCAGGCAGTGGATGTGGTGG
GCCAGGCTGGGAAGCCAAAAACAATCACAGGGTTCCAGACTCATACAACGCCAGTGTTGCTGGCCCATGGGGAGCGGGCA
GAGTTGGCCACTGAGGAGTTTCTTCCTGTCACCCCCATTCTGGAAGGCTTTGTTATTCTTCGGAAGAACCCCAACTATGA
TCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 180 .57 RPM |
| SRP007412_cerebellum | 190 .14 RPM |
| SRP007412_heart | 209 .23 RPM |
| SRP007412_kidney | 187 .70 RPM |
| SRP007412_liver | 167 .07 RPM |
| SRP007412_testis | 434 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000175166 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027136 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006305 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014354 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015689 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_209 | 94.22 | 97.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3247 | 87.67 | 57.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000006998 retrocopies