Parental gene: | Cbx5, ENSMUSG00000009575 |
| Aliases: | Cbx5, 2610029O15Rik, C75991, HP1, Hp1a, Hp1alpha |
| Description: | chromobox 5 [Source:MGI Symbol;Acc:MGI:109372] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 15:103191543..103239816(-) |
>ENSMUSG00000009575
ATGGGAAAGAAGACCAAGAGGACAGCCGACAGCTCTTCTTCAGAGGATGAGGAGGAATATGTGGTGGAAAAGGTGTTGGA
CAGGCGCATGGTTAAGGGGCAAGTGGAATATCTGTTGAAGTGGAAAGGCTTTTCTGAGGAGCACAATACTTGGGAACCTG
AGAAGAACTTGGATTGTCCTGAACTAATTTCTGAGTTTATGAAAAAGTATAAGAAGATGAAGGAGGGTGAAAACAATAAG
CCCAGGGAGAAATCAGAAGGAAACAAGAGGAAATCCAGTTTCTCCAACAGCGCTGATGATATTAAATCTAAAAAAAAGAG
AGAGCAAAGCAATGATATCGCTCGGGGCTTTGAGAGAGGACTGGAACCAGAAAAGATCATCGGAGCAACAGATTCCTGCG
GTGACTTAATGTTCTTAATGAAATGGAAAGACACAGATGAAGCTGACCTGGTTCTTGCAAAAGAAGCTAACGTGAAGTGT
CCACAGATTGTGATAGCATTTTATGAAGAGAGACTGACGTGGCACGCATATCCAGAGGATGCGGAAAACAAAGAAAAAGA
AAGCGCGAAGAGCTAA
ATGGGAAAGAAGACCAAGAGGACAGCCGACAGCTCTTCTTCAGAGGATGAGGAGGAATATGTGGTGGAAAAGGTGTTGGA
CAGGCGCATGGTTAAGGGGCAAGTGGAATATCTGTTGAAGTGGAAAGGCTTTTCTGAGGAGCACAATACTTGGGAACCTG
AGAAGAACTTGGATTGTCCTGAACTAATTTCTGAGTTTATGAAAAAGTATAAGAAGATGAAGGAGGGTGAAAACAATAAG
CCCAGGGAGAAATCAGAAGGAAACAAGAGGAAATCCAGTTTCTCCAACAGCGCTGATGATATTAAATCTAAAAAAAAGAG
AGAGCAAAGCAATGATATCGCTCGGGGCTTTGAGAGAGGACTGGAACCAGAAAAGATCATCGGAGCAACAGATTCCTGCG
GTGACTTAATGTTCTTAATGAAATGGAAAGACACAGATGAAGCTGACCTGGTTCTTGCAAAAGAAGCTAACGTGAAGTGT
CCACAGATTGTGATAGCATTTTATGAAGAGAGACTGACGTGGCACGCATATCCAGAGGATGCGGAAAACAAAGAAAAAGA
AAGCGCGAAGAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 249 .24 RPM |
| SRP007412_cerebellum | 183 .98 RPM |
| SRP007412_heart | 98 .87 RPM |
| SRP007412_kidney | 135 .25 RPM |
| SRP007412_liver | 46 .15 RPM |
| SRP007412_testis | 84 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000001220 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000018666 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000029836 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000036841 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_650 | 57.52 | 57.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000009575 retrocopies