Parental gene: | Smndc1, ENSMUSG00000025024 |
| Aliases: | Smndc1, 2410004J23Rik, 4933440I19Rik |
| Description: | survival motor neuron domain containing 1 [Source:MGI Symbol;Acc:MGI:1923729] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 19:53379213..53390573(-) |
>ENSMUSG00000025024
ATGTCAGAGGATCTAGCAAAACAGTTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAAGCTGCCCTTTCTGGAAATGG
AGAAAATGAAGATCTATTGAAACTGAAGAAGGATTTGCAAGAAGTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGC
CTTCGGAGACGCTCGCAAGCTCAGACAGTTTTGCTTCTACTCAGCCCACTCATTCATGGAAAGTAGGGGACAAGTGCATG
GCCGTGTGGAGTGAAGACGGACAGTGTTACGAAGCGGAGATTGAAGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC
CTTTGCTGTTTATGGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCGAAAGAGG
ACAGCGGCAACAAACCCATGTCAAAAAAAGAAATGATCGCCCAGCAGCGTGAATATAAAAAGAAAAAAGCTTTGAAAAAA
GCACAGAGAATAAAAGAGTTGGAGCAGGAGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTC
CAAGAACAAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAACTT
GTGGAATTGCTGACAAGCCCATGACACAGTATCAAGATACATCCAAGTACAATGTCAGGCATTTGATGCCTCAGTAA
ATGTCAGAGGATCTAGCAAAACAGTTGGCTAGCTACAAAGCTCAACTCCAGCAAGTAGAAGCTGCCCTTTCTGGAAATGG
AGAAAATGAAGATCTATTGAAACTGAAGAAGGATTTGCAAGAAGTAATAGAACTGACCAAAGACCTTCTGTCAACTCAGC
CTTCGGAGACGCTCGCAAGCTCAGACAGTTTTGCTTCTACTCAGCCCACTCATTCATGGAAAGTAGGGGACAAGTGCATG
GCCGTGTGGAGTGAAGACGGACAGTGTTACGAAGCGGAGATTGAAGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC
CTTTGCTGTTTATGGCAATGCCGAAGTGACGCCATTGCTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCGAAAGAGG
ACAGCGGCAACAAACCCATGTCAAAAAAAGAAATGATCGCCCAGCAGCGTGAATATAAAAAGAAAAAAGCTTTGAAAAAA
GCACAGAGAATAAAAGAGTTGGAGCAGGAGCGAGAGGACCAGAAGGTGAAATGGCAGCAGTTCAACAACAGGGCGTACTC
CAAGAACAAGAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCTCCAGAAAGTGTAACGGGCAAAGTTGGAGTAGGAACTT
GTGGAATTGCTGACAAGCCCATGACACAGTATCAAGATACATCCAAGTACAATGTCAGGCATTTGATGCCTCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 23 .43 RPM |
| SRP007412_cerebellum | 23 .19 RPM |
| SRP007412_heart | 16 .62 RPM |
| SRP007412_kidney | 25 .33 RPM |
| SRP007412_liver | 13 .57 RPM |
| SRP007412_testis | 37 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000007775 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006636 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2685 | 94.08 | 63.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000025024 retrocopies