Parental gene: | Smap1, ENSMUSG00000026155 |
| Aliases: | Smap1, 1700056O10Rik, 4921514B13Rik, 4921525H11Rik, AI462175 |
| Description: | stromal membrane-associated protein 1 [Source:MGI Symbol;Acc:MGI:2138261] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:23844845..23922317(-) |
>ENSMUSG00000026155
ATGGCGACACGCTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTGTCCAAACTGCTGAGGGA
GGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCCCGATGGGCTTCCTGGAATATTGGTGTGTTTATTTGCA
TCAGATGTGCTGGAATTCATAGAAATCTTGGGGTTCATATATCCAGAGTCAAGTCAGTCAACCTAGACCAATGGACACCA
GAACAGATACAGTGCATGCAAGATATGGGAAATACTAAAGCAAGACTACTTTATGAAGCCAATCTTCCAGAGAACTTTCG
AAGACCACAGACAGATCAAGCAGTAGAGTTTTTCATCAGAGATAAATATGAAAAGAAGAAATACTATGATAAAAATGCAA
TAGCTATCACAAATAAAGAAAAGGAAAAAAAAAAGGACGAGAAAAAGAGAGAAAAGGAGCCAGAAAAGCCTGCAAAACCA
CTAACAACGGAAAAGCTGCCGAAGAAAGAAGAGCAACAACTTGAGCCTAAGAAAAGCACCAGCCCAAAAAATGCTGCAGA
GCCCACTATTGATCTTCTAGGACTTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCC
TGAGTGATGATCTGGACATTTTTGGACCAATGATTTCTAACCCTTTACCTGCAGCTGTCATGCCCCCGGCTCAGGGGACT
GCCTCCGTACCAGCACCTGCTACCCTGTCTACCGTTACATCTGGGGACCTGGATCTGTTTACTGAGCAAACTACAAAGTC
AGAAGAAGTAGCAAAGAAACAACTCTCCAAAGACTCCATCTTATCTCTGTATGGTACAGGAGCACAGCAAAGCACTCCTG
GTGTGTTTATGGGACCCACAAATATACCATTTACCTCACAAGCACCGACTGCATTTCAAGGTTTTCCTTCCATGGGCGTC
CCAGTGCCTGCAGCTCCCGGTCTTATAGGAAATATGATGGGACAGAATACTGGCATGATGGTGGGCATGCCCATGCACAA
TGGGTTCATGGGAAACGCACAGACTGGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATGGTGGGAC
AAATGGGTGCACCACAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGATGAATCAGCAG
ATGGCTGCCATGAACCTCAGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTGGTCTGG
AAGCTCATCGGGGCAGACGCTGAGCACACAGCTGTGGAAGTAA
ATGGCGACACGCTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTGTCCAAACTGCTGAGGGA
GGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCCCGATGGGCTTCCTGGAATATTGGTGTGTTTATTTGCA
TCAGATGTGCTGGAATTCATAGAAATCTTGGGGTTCATATATCCAGAGTCAAGTCAGTCAACCTAGACCAATGGACACCA
GAACAGATACAGTGCATGCAAGATATGGGAAATACTAAAGCAAGACTACTTTATGAAGCCAATCTTCCAGAGAACTTTCG
AAGACCACAGACAGATCAAGCAGTAGAGTTTTTCATCAGAGATAAATATGAAAAGAAGAAATACTATGATAAAAATGCAA
TAGCTATCACAAATAAAGAAAAGGAAAAAAAAAAGGACGAGAAAAAGAGAGAAAAGGAGCCAGAAAAGCCTGCAAAACCA
CTAACAACGGAAAAGCTGCCGAAGAAAGAAGAGCAACAACTTGAGCCTAAGAAAAGCACCAGCCCAAAAAATGCTGCAGA
GCCCACTATTGATCTTCTAGGACTTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCC
TGAGTGATGATCTGGACATTTTTGGACCAATGATTTCTAACCCTTTACCTGCAGCTGTCATGCCCCCGGCTCAGGGGACT
GCCTCCGTACCAGCACCTGCTACCCTGTCTACCGTTACATCTGGGGACCTGGATCTGTTTACTGAGCAAACTACAAAGTC
AGAAGAAGTAGCAAAGAAACAACTCTCCAAAGACTCCATCTTATCTCTGTATGGTACAGGAGCACAGCAAAGCACTCCTG
GTGTGTTTATGGGACCCACAAATATACCATTTACCTCACAAGCACCGACTGCATTTCAAGGTTTTCCTTCCATGGGCGTC
CCAGTGCCTGCAGCTCCCGGTCTTATAGGAAATATGATGGGACAGAATACTGGCATGATGGTGGGCATGCCCATGCACAA
TGGGTTCATGGGAAACGCACAGACTGGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATGGTGGGAC
AAATGGGTGCACCACAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGATGAATCAGCAG
ATGGCTGCCATGAACCTCAGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTGGTCTGG
AAGCTCATCGGGGCAGACGCTGAGCACACAGCTGTGGAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 30 .68 RPM |
| SRP007412_cerebellum | 24 .45 RPM |
| SRP007412_heart | 5 .29 RPM |
| SRP007412_kidney | 17 .13 RPM |
| SRP007412_liver | 10 .62 RPM |
| SRP007412_testis | 97 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000001865 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000007247 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007948 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_3253 | 51.07 | 50.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000026155 retrocopies