Parental gene: | Cenpc1, ENSMUSG00000029253 |
| Aliases: | Cenpc1, CENP-C, Cenpc |
| Description: | centromere protein C1 [Source:MGI Symbol;Acc:MGI:99700] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 5:86012042..86065583(-) |
>ENSMUSG00000029253
ATGGCCTCGTTCCATCTGGATCATCTAAAGAACTACCACAGAAGATATTGCCGGTCTTCCAGAGCACCCAACATTCATAC
AAAAAAAGGCCAGAACATGCTGGAAATCTTACAAGATTGTTTTGAAGATCAGAGTAAGGCTTCATTTCTTGATGATTTTA
CAGAGTCATTGACTTCTTCAACACAAAAAAAGAAAGCCAATTATAGTCAATCATCAAGCAAAAAGTGCCCAGAGTCACAT
TCCAAACCAGTTCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAGCGTCTGCAGAGCCCAGTGAAGCCGCTGGTGG
ATCAGTTCAGGCTAATGAAGTTCACCATGGTGCGTCTGATGAATTGGACTTATGTGTTGGCTCCCCTGTGGTTCTCCTGG
ATGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTA
GATAGGCAGGCTTCAAATAAAAACATTTCTTTTAAAACCAGGAAAAGGTTAAACTTTGAAGATAAAGTTACTTTGAGCAC
AGCAGAAACAGAGAACAGTGTGTTACAAGTAGAGGATAACTTATCCAAGGGACAAGAAGGGACATCATCAGAAATCACTC
AGAAAAGAGACGATCTGAGTTCTGATGTCCAATCACGTTCTAAGAAGAATTTTTCGGAGTTGTTTTTAGAGACTGTCAAG
AGGAAAAGTAAATCCAGTTCTGTGGTCAGGCACACAGCAGCAGTTCCATTTTCTCCGCCTCCTCCAAGTGACATGAAATT
ATTAGAAGATGAATTTATTATTGATCGGTCAGATAGAAGTTTTTCAAGTCGACTTTGGGTGATGATACCAAGCAAAGACA
GGCATCTGAGCGCCCACAAGCCATCTCCTGAAAACACTGCACTGCTTCAAGGTAAGAAGTCAAGAGAGAAATCTCATAGT
TTATCTGCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGGAAGCTCAGCTCTCTGTTGAAGA
AAACCCGGCAACTACTTGTACAGATGAGTTGGAAAATGATTGTCGATCTCCTGAAAATAAAATGCAATCTGAGACTGCCA
AAACCCCACCCGCATGGGAAAGGACTACGAAACAGAGCCAGAGGAGAGTGTCTAAGCCTAAAGCAGCTGAAGAGCTCAGG
AAGGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATAT
GAAGGACTGTGAAGAGGTGAGGAATGAGCCTAATCCCAAGAAACAGAAGCCAGCTCTTGAAAATAAGAAAAAAACCAATA
GCACCCAAACCAATAAGGAAAAATCTGGAAAGAAATTTTTTTCTGGTGGGTCCAAGAACAAATTTGTTCCCAAAAAAGTA
ACTTTGACTTCCAGGAGAAGTTGTAGAATTTCTCAGCGTCCATCTGAGTGGTGGAGGGTAAAATCAGATGAAAGTTCTGT
TGATAGAAATCCTTCAAAAGAAAATAACTCACCAGTGGTATATCCCAATAAAAAGAAGCAGACTAAGAGAAATCATGTAT
CTAAGAGGGCTGGGAAGAAACCTGGTTCATCAAAAAGACAGAAGACAGAGATGAGCCCAAGAGTACAGAAGTCTTTAAAT
GTAAAGGATTCTGGAGGAACTGTTAGTGGCCATGATGACACTTCTCGTTCCCAGAGGAAGCCATTGAAAATCATTGAGGC
AGACCCAACTCAGAAGAGCCTTGCTATTTCTCGACCTAAAAGAGGCTGTAAGTATCGAAACAATGTTATGACATCACCGA
ATGTTCATTTAAAGTCTCATACTGAGGAATATACAAGCAAGACACAAATGGAGTCTGCTTCCAATTCAGAAATGTCTAAA
CGTTCAGTGTGGGAAGAAAGTGGACCTTCCAGGTTCAAGAATTATGAAATGCCAGGGAGCAGTAATTCTGAGATGGGTGA
TGAACAGGACCAGAAGAGTTTGCATTTTACAACAAGAAGTTTTAATATGGTACCAGATAAAAAATTACATCACAAATTAG
TACTGCCCTCCAACTCACCAAATGTTCGTCGATCTAATAGAATACGTTTGAAACCTCTGGAGTATTGGCGAGGGGAACGG
GTAGATTATCAAGAAAGTTCGTCGGGACAACTTGTGCTTGAAATAATATCCCCATCTTCAGTACCCACGAAAATAAAGGC
ACAAAGAAACCTCGGCAAAGTCAACAAAAAAGTTACCAAGAAGCCGACCCATCTCAATAGCCATGAAAAGGCTAAGATGG
AGCTGCCTCTGGATATGCGTCTGGGAGATCCCTTTCAGGCAACATTGGCGAAGGACCCAGAAACCGCAGAGCTTGTCCCC
ATGGATCTTATAAGACCACGAGATACATACCGCTTTTTTGTTGAGCAACATGGTTTGAAAGTTTTTAAAACATTGGATAC
AATATATTTTTCTACTGGAAAATTGGTTTTAGGACCTTATGAAGAGAAAGGAAAACAGCATGTTGGCCAAGATATATTGG
TTTTTTATGTTAACTTTGGTGACCTTTTATGTACATTACATGAAACACCTTATAAGTTAACTACTGGGGATTCATTCTAT
GTTCCTTCAGGTAATCATTACAACATTAAAAACCTCTTGAATGTGGAAAGTAGTCTTCTTTTTACTCAAATAAAAAGGTG
A
ATGGCCTCGTTCCATCTGGATCATCTAAAGAACTACCACAGAAGATATTGCCGGTCTTCCAGAGCACCCAACATTCATAC
AAAAAAAGGCCAGAACATGCTGGAAATCTTACAAGATTGTTTTGAAGATCAGAGTAAGGCTTCATTTCTTGATGATTTTA
CAGAGTCATTGACTTCTTCAACACAAAAAAAGAAAGCCAATTATAGTCAATCATCAAGCAAAAAGTGCCCAGAGTCACAT
TCCAAACCAGTTCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAGCGTCTGCAGAGCCCAGTGAAGCCGCTGGTGG
ATCAGTTCAGGCTAATGAAGTTCACCATGGTGCGTCTGATGAATTGGACTTATGTGTTGGCTCCCCTGTGGTTCTCCTGG
ATGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTA
GATAGGCAGGCTTCAAATAAAAACATTTCTTTTAAAACCAGGAAAAGGTTAAACTTTGAAGATAAAGTTACTTTGAGCAC
AGCAGAAACAGAGAACAGTGTGTTACAAGTAGAGGATAACTTATCCAAGGGACAAGAAGGGACATCATCAGAAATCACTC
AGAAAAGAGACGATCTGAGTTCTGATGTCCAATCACGTTCTAAGAAGAATTTTTCGGAGTTGTTTTTAGAGACTGTCAAG
AGGAAAAGTAAATCCAGTTCTGTGGTCAGGCACACAGCAGCAGTTCCATTTTCTCCGCCTCCTCCAAGTGACATGAAATT
ATTAGAAGATGAATTTATTATTGATCGGTCAGATAGAAGTTTTTCAAGTCGACTTTGGGTGATGATACCAAGCAAAGACA
GGCATCTGAGCGCCCACAAGCCATCTCCTGAAAACACTGCACTGCTTCAAGGTAAGAAGTCAAGAGAGAAATCTCATAGT
TTATCTGCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGGAAGCTCAGCTCTCTGTTGAAGA
AAACCCGGCAACTACTTGTACAGATGAGTTGGAAAATGATTGTCGATCTCCTGAAAATAAAATGCAATCTGAGACTGCCA
AAACCCCACCCGCATGGGAAAGGACTACGAAACAGAGCCAGAGGAGAGTGTCTAAGCCTAAAGCAGCTGAAGAGCTCAGG
AAGGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATAT
GAAGGACTGTGAAGAGGTGAGGAATGAGCCTAATCCCAAGAAACAGAAGCCAGCTCTTGAAAATAAGAAAAAAACCAATA
GCACCCAAACCAATAAGGAAAAATCTGGAAAGAAATTTTTTTCTGGTGGGTCCAAGAACAAATTTGTTCCCAAAAAAGTA
ACTTTGACTTCCAGGAGAAGTTGTAGAATTTCTCAGCGTCCATCTGAGTGGTGGAGGGTAAAATCAGATGAAAGTTCTGT
TGATAGAAATCCTTCAAAAGAAAATAACTCACCAGTGGTATATCCCAATAAAAAGAAGCAGACTAAGAGAAATCATGTAT
CTAAGAGGGCTGGGAAGAAACCTGGTTCATCAAAAAGACAGAAGACAGAGATGAGCCCAAGAGTACAGAAGTCTTTAAAT
GTAAAGGATTCTGGAGGAACTGTTAGTGGCCATGATGACACTTCTCGTTCCCAGAGGAAGCCATTGAAAATCATTGAGGC
AGACCCAACTCAGAAGAGCCTTGCTATTTCTCGACCTAAAAGAGGCTGTAAGTATCGAAACAATGTTATGACATCACCGA
ATGTTCATTTAAAGTCTCATACTGAGGAATATACAAGCAAGACACAAATGGAGTCTGCTTCCAATTCAGAAATGTCTAAA
CGTTCAGTGTGGGAAGAAAGTGGACCTTCCAGGTTCAAGAATTATGAAATGCCAGGGAGCAGTAATTCTGAGATGGGTGA
TGAACAGGACCAGAAGAGTTTGCATTTTACAACAAGAAGTTTTAATATGGTACCAGATAAAAAATTACATCACAAATTAG
TACTGCCCTCCAACTCACCAAATGTTCGTCGATCTAATAGAATACGTTTGAAACCTCTGGAGTATTGGCGAGGGGAACGG
GTAGATTATCAAGAAAGTTCGTCGGGACAACTTGTGCTTGAAATAATATCCCCATCTTCAGTACCCACGAAAATAAAGGC
ACAAAGAAACCTCGGCAAAGTCAACAAAAAAGTTACCAAGAAGCCGACCCATCTCAATAGCCATGAAAAGGCTAAGATGG
AGCTGCCTCTGGATATGCGTCTGGGAGATCCCTTTCAGGCAACATTGGCGAAGGACCCAGAAACCGCAGAGCTTGTCCCC
ATGGATCTTATAAGACCACGAGATACATACCGCTTTTTTGTTGAGCAACATGGTTTGAAAGTTTTTAAAACATTGGATAC
AATATATTTTTCTACTGGAAAATTGGTTTTAGGACCTTATGAAGAGAAAGGAAAACAGCATGTTGGCCAAGATATATTGG
TTTTTTATGTTAACTTTGGTGACCTTTTATGTACATTACATGAAACACCTTATAAGTTAACTACTGGGGATTCATTCTAT
GTTCCTTCAGGTAATCATTACAACATTAAAAACCTCTTGAATGTGGAAAGTAGTCTTCTTTTTACTCAAATAAAAAGGTG
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 16 .38 RPM |
| SRP007412_cerebellum | 17 .72 RPM |
| SRP007412_heart | 5 .95 RPM |
| SRP007412_kidney | 7 .70 RPM |
| SRP007412_liver | 2 .79 RPM |
| SRP007412_testis | 25 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000145241 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009058 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014736 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016096 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1910 | 84.62 | 57.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000029253 retrocopies