Parental gene: | Psma4, ENSMUSG00000032301 |
| Aliases: | Psma4, C9 |
| Description: | proteasome (prosome, macropain) subunit, alpha type 4 [Source:MGI Symbol;Acc:MGI:1347060] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 9:54950789..54958030(+) |
>ENSMUSG00000032301
ATGTCTCGAAGATATGACTCCAGGACCACAATATTTTCTCCAGAAGGTCGCTTATACCAAGTGGAGTATGCCATGGAAGC
CATTGGACATGCAGGCACCTGTTTGGGGATTTTAGCCAATGATGGAGTTTTGCTTGCAGCGGAGAGGCGCAACATCCACA
AGCTTCTTGATGAAGTCTTCTTTTCTGAGAAAATTTATAAACTTAATGAGGACATGGCTTGCAGCGTGGCAGGCATAACA
TCTGATGCTAACGTTCTGACTAACGAGCTAAGGCTCATTGCTCAACGGTACTTATTACAGTATCAGGAGCCAATTCCCTG
TGAGCAGTTGGTTACAGCACTGTGTGATATCAAACAGGCGTACACACAGTTTGGAGGCAAACGTCCCTTTGGTGTTTCTT
TGCTGTATATTGGCTGGGATAAGCACTATGGCTTTCAGCTCTATCAGAGTGACCCAAGTGGAAACTATGGGGGATGGAAA
GCCACATGCATTGGGAACAACAGTGCTGCGGCTGTGTCAATGTTGAAACAAGACTACAAAGAAGGCGAAATGACTCTGAA
GTCAGCGCTTGCTCTGGCTGTTAAGGTGCTAAATAAGACAATGGATGTTAGTAAACTGTCAGCTGAAAAAGTGGAAATCG
CCACACTAACAAGAGAGAGTGGGAAGACGGTGATCAGAGTCCTCAAGCAAAAGGAAGTGGAACAGTTGATCAAAAAACAT
GAAGAGGAAGAAGCTAAGGCTGAGCGGGAGAAGAAAGAAAAAGAACAGAGAGAAAAGGATAAATAG
ATGTCTCGAAGATATGACTCCAGGACCACAATATTTTCTCCAGAAGGTCGCTTATACCAAGTGGAGTATGCCATGGAAGC
CATTGGACATGCAGGCACCTGTTTGGGGATTTTAGCCAATGATGGAGTTTTGCTTGCAGCGGAGAGGCGCAACATCCACA
AGCTTCTTGATGAAGTCTTCTTTTCTGAGAAAATTTATAAACTTAATGAGGACATGGCTTGCAGCGTGGCAGGCATAACA
TCTGATGCTAACGTTCTGACTAACGAGCTAAGGCTCATTGCTCAACGGTACTTATTACAGTATCAGGAGCCAATTCCCTG
TGAGCAGTTGGTTACAGCACTGTGTGATATCAAACAGGCGTACACACAGTTTGGAGGCAAACGTCCCTTTGGTGTTTCTT
TGCTGTATATTGGCTGGGATAAGCACTATGGCTTTCAGCTCTATCAGAGTGACCCAAGTGGAAACTATGGGGGATGGAAA
GCCACATGCATTGGGAACAACAGTGCTGCGGCTGTGTCAATGTTGAAACAAGACTACAAAGAAGGCGAAATGACTCTGAA
GTCAGCGCTTGCTCTGGCTGTTAAGGTGCTAAATAAGACAATGGATGTTAGTAAACTGTCAGCTGAAAAAGTGGAAATCG
CCACACTAACAAGAGAGAGTGGGAAGACGGTGATCAGAGTCCTCAAGCAAAAGGAAGTGGAACAGTTGATCAAAAAACAT
GAAGAGGAAGAAGCTAAGGCTGAGCGGGAGAAGAAAGAAAAAGAACAGAGAGAAAAGGATAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 40 .56 RPM |
| SRP007412_cerebellum | 40 .03 RPM |
| SRP007412_heart | 55 .57 RPM |
| SRP007412_kidney | 82 .39 RPM |
| SRP007412_liver | 81 .27 RPM |
| SRP007412_testis | 43 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000010369 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000027860 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011678 | possible_ortholog | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011745 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1035 | 82.39 | 65.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1707 | 96.32 | 52.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000032301 retrocopies