Parental gene:

Psma4, ENSMUSG00000032301

Aliases:Psma4, C9
Description:proteasome (prosome, macropain) subunit, alpha type 4 [Source:MGI Symbol;Acc:MGI:1347060]
Organism:Mouse (Mus musculus)
Coordinates:9:54950789..54958030(+)


>ENSMUSG00000032301
ATGTCTCGAAGATATGACTCCAGGACCACAATATTTTCTCCAGAAGGTCGCTTATACCAAGTGGAGTATGCCATGGAAGC
CATTGGACATGCAGGCACCTGTTTGGGGATTTTAGCCAATGATGGAGTTTTGCTTGCAGCGGAGAGGCGCAACATCCACA
AGCTTCTTGATGAAGTCTTCTTTTCTGAGAAAATTTATAAACTTAATGAGGACATGGCTTGCAGCGTGGCAGGCATAACA
TCTGATGCTAACGTTCTGACTAACGAGCTAAGGCTCATTGCTCAACGGTACTTATTACAGTATCAGGAGCCAATTCCCTG
TGAGCAGTTGGTTACAGCACTGTGTGATATCAAACAGGCGTACACACAGTTTGGAGGCAAACGTCCCTTTGGTGTTTCTT
TGCTGTATATTGGCTGGGATAAGCACTATGGCTTTCAGCTCTATCAGAGTGACCCAAGTGGAAACTATGGGGGATGGAAA
GCCACATGCATTGGGAACAACAGTGCTGCGGCTGTGTCAATGTTGAAACAAGACTACAAAGAAGGCGAAATGACTCTGAA
GTCAGCGCTTGCTCTGGCTGTTAAGGTGCTAAATAAGACAATGGATGTTAGTAAACTGTCAGCTGAAAAAGTGGAAATCG
CCACACTAACAAGAGAGAGTGGGAAGACGGTGATCAGAGTCCTCAAGCAAAAGGAAGTGGAACAGTTGATCAAAAAACAT
GAAGAGGAAGAAGCTAAGGCTGAGCGGGAGAAGAAAGAAAAAGAACAGAGAGAAAAGGATAAATAG

Library Parental gene expression (RPM)
SRP007412_brain 40 .56 RPM
SRP007412_cerebellum 40 .03 RPM
SRP007412_heart 55 .57 RPM
SRP007412_kidney 82 .39 RPM
SRP007412_liver 81 .27 RPM
SRP007412_testis 43 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010369 possible_ortholog 1 retrogene
retro_cjac_58,
Myotis lucifugus ENSMLUG00000027860 ortholog_one2one 1 retrogene
retro_mluc_1404,
Tupaia belangeri ENSTBEG00000011678 possible_ortholog 5 retrogenes
retro_tbel_1746, retro_tbel_2953, retro_tbel_3324, retro_tbel_4164, retro_tbel_614,
Tarsius syrichta ENSTSYG00000011745 possible_ortholog 1 retrogene
retro_tsyr_21,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1035 82.39 65.90
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2. retro_mmus_1707 96.32 52.11
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Download FASTA sequences of all ENSMUSG00000032301 retrocopies