Parental gene:

LSM1, ENSOCUG00000015399

Aliases:None
Description:LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:20472]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018706:5254965..5267274(+)


>ENSOCUG00000015399
ATGAACTATATGCCCGGCACCGCCAGCCTCATCGAGGACATCGACAAAAAGCACTTGGTCCTGCTTCGAGATGGAAGGAC
ACTTATAGGCTTTTTAAGAAGCATCGATCAGTTTGCTAACTTAGTGCTACATCAGACTGTGGAGCGTATTCATGTGGGCA
AAAAATACGGTGATATTCCTCGAGGGATTTTTGTGGTCAGAGGAGAGAATGTGGTCCTTCTAGGAGAAATAGACTTGGAA
AAGGAAAGTGACACACCCCTGCAGCAAGTGTCCATCGAAGAAATCCTGGAAGAACAGAGGGTGGAACAGCAGACCAAGCT
GGAAGCGGAGAAGCTCAAAGTGCAGGCTCTCAAGGACCGCGGCCTCTCCATTCCCCGCGCAGACACTCTGGATGAGTACT
GA

Library Parental gene expression (RPM)
SRP017611_brain 11 .42 RPM
SRP017611_kidney 13 .99 RPM
SRP017611_liver 2 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011141 ortholog_one2one 1 retrogene
retro_amel_263,
Myotis lucifugus ENSMLUG00000003734 ortholog_one2one 1 retrogene
retro_mluc_723,
Mustela putorius furo ENSMPUG00000009883 ortholog_one2one 1 retrogene
retro_mputfur_490,
Mus musculus ENSMUSG00000037296 ortholog_one2one 1 retrogene
retro_mmus_3725,
Sarcophilus harrisii ENSSHAG00000017260 ortholog_one2one 1 retrogene
retro_shar_532,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1276 71.84 75.94
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Download FASTA sequences of all ENSOCUG00000015399 retrocopies