Parental gene: | MMP1, ENSOCUG00000017958 |
| Aliases: | MMP1, MMP-1 |
| Description: | matrix metallopeptidase 1 (interstitial collagenase) (MMP1), mRNA [Source:RefSeq mRNA;Acc:NM_001171139] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:113746996..113756596(+) |
>ENSOCUG00000017958
ATGCCCGGCTTGCCTCTGCTGCTGCTACTGCTCTGGGGAGTGGGCTCCCATGGCTTCCCAGCAGCTTCAGAAACACAAGA
GCAAGATGTGGAGATGGTCCAGAAATACCTGGAAAACTACTACAATCTGAAGGATGATTGGAGGAAAATTCCAAAGCAGA
GAGGCAATGGCCTAGCAGTTGAGAAGCTGAAGCAAATGCAGGAATTCTTTGGGCTGAAAGTGACTGGGAAGCCAGATGCT
GAAACCCTGAAGATGATGAAGCAACCCAGGTGTGGAGTGCCTGATGTGGCTCAGTTCGTCCTCACTCCAGGGAACCCTCG
TTGGGAACAAACACATCTGACTTACAGAATTGAAAATTACACACCAGACCTGTCAAGGGCAGATGTGGACAATGCCATTG
AGAAAGCTTTTCAACTCTGGAGTAATGTCACACCCCTGACATTCACCAAAGTCTCCAAGGGTCAAGCAGACATCATGATA
TCCTTTGTCAGGGGAGATCATCGTGACAATTCTCCCTTTGATGGACCTGAAGGACAGCTCGCTCATGCTTTTCAACCAGG
CCTGGGCATTGGAGGGGATGTTCATTTTGATGAAGATGACAGGTGGACCAAAGATTTCAGAAATTACAACCTGTATCGTG
TTGCAGCTCATGAACTGGGCCATTCCCTTGGACTCTCCCATTCTACTGATATTGGGGCTTTGATGTACCCCAACTATATG
TTCAGTGGTGATGTTCAGTTAGCTCAGGATGACATTGATGGCATCCAAGCCATATATGGACCTTCCCAAAATCCCAGTCA
GCCAGTAGGCCCACAGACCCCAAAAGTGTGTGATAGTAAACTGACCTTTGATGCTATAACCACAATTCGGGGAGAAATAA
TGTTCTTTAAAGACAGGTTCTACATGCGGGCAAATCCCTACTACTCAGAAGTTGAGCTCAATTTCATCTCTGTTTTCTGG
CCACATCTGCCTAATGGACTTCAAGCTGCTTATGAAGTTGCCCATAGAGATGAAATTCTGTTTTTCAAAGGTAACAAGTA
CTGGACTGTGCAGGGGCAGAATGAGCTACCAGGATACCCCAAGGACATTCACAGCTCCTTTGGCTTCCCTAGAAGTGTGA
ATCATATTGACGCTGCTGTTTCTGAGGAGGATACTGGAAAAACATACTTCTTTGTTGCTAACAAGTACTGGAGGTATGAT
GAATATAAACGATCTATGGATGCAGGTTATCCCAAAATGATAGAATATGACTTCCCAGGAATTGGAAACAAGGTTGACGC
TGTTTTCAAGAAAGATGGATTTTTCTATTTCTTTCATGGAACAAGGCAATACAAATTTGATCCTAAAACGAAGAGAATTC
TGACTCTCCAGAAAGCTAATAGCTGGTTCAACTGCAGGAAAAATTGA
ATGCCCGGCTTGCCTCTGCTGCTGCTACTGCTCTGGGGAGTGGGCTCCCATGGCTTCCCAGCAGCTTCAGAAACACAAGA
GCAAGATGTGGAGATGGTCCAGAAATACCTGGAAAACTACTACAATCTGAAGGATGATTGGAGGAAAATTCCAAAGCAGA
GAGGCAATGGCCTAGCAGTTGAGAAGCTGAAGCAAATGCAGGAATTCTTTGGGCTGAAAGTGACTGGGAAGCCAGATGCT
GAAACCCTGAAGATGATGAAGCAACCCAGGTGTGGAGTGCCTGATGTGGCTCAGTTCGTCCTCACTCCAGGGAACCCTCG
TTGGGAACAAACACATCTGACTTACAGAATTGAAAATTACACACCAGACCTGTCAAGGGCAGATGTGGACAATGCCATTG
AGAAAGCTTTTCAACTCTGGAGTAATGTCACACCCCTGACATTCACCAAAGTCTCCAAGGGTCAAGCAGACATCATGATA
TCCTTTGTCAGGGGAGATCATCGTGACAATTCTCCCTTTGATGGACCTGAAGGACAGCTCGCTCATGCTTTTCAACCAGG
CCTGGGCATTGGAGGGGATGTTCATTTTGATGAAGATGACAGGTGGACCAAAGATTTCAGAAATTACAACCTGTATCGTG
TTGCAGCTCATGAACTGGGCCATTCCCTTGGACTCTCCCATTCTACTGATATTGGGGCTTTGATGTACCCCAACTATATG
TTCAGTGGTGATGTTCAGTTAGCTCAGGATGACATTGATGGCATCCAAGCCATATATGGACCTTCCCAAAATCCCAGTCA
GCCAGTAGGCCCACAGACCCCAAAAGTGTGTGATAGTAAACTGACCTTTGATGCTATAACCACAATTCGGGGAGAAATAA
TGTTCTTTAAAGACAGGTTCTACATGCGGGCAAATCCCTACTACTCAGAAGTTGAGCTCAATTTCATCTCTGTTTTCTGG
CCACATCTGCCTAATGGACTTCAAGCTGCTTATGAAGTTGCCCATAGAGATGAAATTCTGTTTTTCAAAGGTAACAAGTA
CTGGACTGTGCAGGGGCAGAATGAGCTACCAGGATACCCCAAGGACATTCACAGCTCCTTTGGCTTCCCTAGAAGTGTGA
ATCATATTGACGCTGCTGTTTCTGAGGAGGATACTGGAAAAACATACTTCTTTGTTGCTAACAAGTACTGGAGGTATGAT
GAATATAAACGATCTATGGATGCAGGTTATCCCAAAATGATAGAATATGACTTCCCAGGAATTGGAAACAAGGTTGACGC
TGTTTTCAAGAAAGATGGATTTTTCTATTTCTTTCATGGAACAAGGCAATACAAATTTGATCCTAAAACGAAGAGAATTC
TGACTCTCCAGAAAGCTAATAGCTGGTTCAACTGCAGGAAAAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .00 RPM |
| SRP017611_kidney | 2 .64 RPM |
| SRP017611_brain | 0 .06 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1695 | 54.85 | 56.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000017958 retrocopies