Parental gene:

EFCAB2, ENSOCUG00000029593

Aliases:None
Description:EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:28166]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:16:22445835..22558185(-)


>ENSOCUG00000029593
ATGATTAGTTTAAGCAGTGTAGCAGAATTACAGAAAAAAATCAAAGAGGCATTTGAAGTATTTGACCGTGAGTCGAATAA
TACAGTGGATGTGAGAGAGATTGGAACGATTGTGAGGTCCCTGGGGTGCTGCCCCAGCGAAGGTGAGCTCCACGACCTGA
TTGCGGAGGTAGAGGAGGAAGAACCCACTGGATACATCCGATATGAAAAATTTCTTCCAGTGATGACCAAAGTACTACTG
GAAAAAAGATACAGACCAATTCCAGAAGATGTTCTTCTTCGAGCTTTTGAGGCTTTAGATCCAGCTAAACGTGGGTTTCT
TACTAAAGAAGAACTGATCAAGTATATGACTGAAGAAGGTGAACCTTTTTCACAAGAGGAAATGGAAGAAATGTTGGCAG
CTACGATTGATCCAGAAACAAATGCAATTCATTACAAGGACTATATAACAACCATGATGATAGATGACAGTTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .08 RPM
SRP017611_kidney 3 .45 RPM
SRP017611_brain 4 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029154 ortholog_one2one 1 retrogene
retro_cfam_781,
Callithrix jacchus ENSCJAG00000016907 ortholog_one2one 1 retrogene
retro_cjac_3944,
Equus caballus ENSECAG00000022403 ortholog_one2one 1 retrogene
retro_ecab_874,
Oryctolagus cuniculus ENSOCUG00000007897 within_species_paralog 1 retrogene
retro_ocun_180,
Tarsius syrichta ENSTSYG00000006254 ortholog_one2one 2 retrogenes
retro_tsyr_1584, retro_tsyr_317,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_612 83.92 90.45
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Download FASTA sequences of all ENSOCUG00000029593 retrocopies