Parental gene: | STRIP1, ENSOPRG00000004063 |
| Aliases: | None |
| Description: | striatin interacting protein 1 [Source:HGNC Symbol;Acc:25916] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_253:100082..116254(+) |
>ENSOPRG00000004063
ATGGAGCCGGCAGCCGGTGCCCCGGGCCCGCTGATTGTGAACAACAAGCAGCCGCAGCCGCCGCCACCTCCTCCGCCGGC
AGCTGCGCAGCCTACCGCCGGGGCACCGCGGACGGGCGGAGGCCTCCTGCCCGGAGGCAAGGCCCGCGAGTTCAACCGCA
ACCAGCGTAAAGACTCGGAGGGCTATTCCGAGTCTCCAGACCTGGAGTTTGAGTATGCGGATACAGACAAATGGGCCGCA
GAGCTCTCAGAGCTTTACAGCTACACGGAAGGACCAGAATTCCTGATGAATCGAAAATGCTTTGAGGAAGACTTTAGGAT
ACATGTGACAGACAAGAAGTGGACTGAGCTGGACACCAACCAGCACCGTACCCATGCCATGAGGCTCCTGGATGGCTTGG
AAGTCACTGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCCATTCTCTATGTTGCCCAAGGCACCTTTGGTGAGTGCAGC
TCGGAGGCAGAGGTGCAGTTCTGGATGCGCTACAACATCTTTTTGCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGA
GCTTCTGAACATGGAAATAGACAACAGTGCCGCATGCAGCAGTGCAGTGAGGAAGCCCGCCATCTCCCTGGCTGACAGCA
CAGATCTGAGGGTCCTGCTCAACATCATGTACCTGATTGTGGAGACCGTGCACCAGGAGTGTGAGGGTGACAAGGCAGAG
TGGAGGACCATGCGGCAGACCTTCAGGGCAGAACTGGGCTCCCCGCTGTACAACAATGAGCCGTTTGCCATCATGCTGTT
TGGGATGGTGACCAAATTTTGCAGTGGCCATGCCCCTCATTTCCCAATGAAGAAAGTTCTCCTGCTTCTGTGGAAGACAG
TGTTGTGCACACTGGGTGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGCGCGCGCTCCTGGGCCTGCCCCCGCTG
CCGGAAGACAGCATCAAGGTGATCCGCAACATGAGGGCTGCCTCTCCGCCAGCATCCGCCTCCGATCTGATTGAGCAGCA
GCAGAAGAGGGGCCGCCGTGAGCACAAGGCCCTGATAAAGCAGGACAACTTAGATGCCTTCAATGAACGGGACCCCTACA
AGGCCGATGACTCCCGAGAAGAGGAGGAGGAGAATGACGATGACAACAGTCTGGAGGGAGAGACCTTTCCCTTGGAGCGG
GATGAGGTGATGCCTCCCCCACTGCAGCACCCCCAGACTGACAGGCTCACCTGCCCCAAGGGGCTCCCCTGGGCCCCCAA
GGTCAGAGAGAAGGACATTGAGATGTTCCTCGAGTCTAGCCGCAGCAAATTCATAGGTTACACTCTAGGCAGTGACACGA
GCACCATAGTAGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGCACAAGTACACATCCATTGCTGAG
GTCCAGGCGCAGATGGAAGAGGAGTACCTCCGTTCGCCTCTCTCAGGGGGAGAAGAGGAGGTTGAACAGGTCCCTGCAGA
AACTCTCTACCAAGGCCTGCTCCCCAGCCTGCCTCAGTACATGATCGCCCTTCTGAAGATCCTGCTGGCTGCAGCCCCCA
CCTCGAAAGCCAAAACCGACTCAATCAACATCCTCGCCGATGTCCTTCCTGAAGAGATGCCCACCACAGTGTTGCAGAGC
ATGAAGCTGGGGGTGGACGTGAACCGCCACAAAGAGGTTATTGTGAAGGCCATTTCTGCTGTGTTACTGCTGCTGCTCAA
GCACTTTAAGCTGAACCATGTCTACCAGTTTGAATACATGGCCCAGCACCTGGTGTTTGCCAACTGCATCCCTTTGATCC
TGAAGTTCTTCAATCAAAACATCATGTCCTACATCACTGCCAAAAATAGCATTTCGGTCCTGGACTACCCTCACTGTGTG
GTGCACGAGCTACCAGAGCTGACGGCGGAGAGTCTGGAAGCAGGTGACAACAACCAGTTTTGCTGGAGGAACCTCTTTTC
TTGTATCAATCTGCTTCGCATCTTGAACAAGCTGACTAAATGGAAGCACTCAAGGACAATGATGCTGGTGGTGTTCAAGT
CGGCGCCCATCCTGAAGCGGGCCCTGAAGGTGAAGCAGGCCATGATGCAGCTGTACGTGCTGAAGCTGCTCAAGGTACAG
ACCAAGTACCTGGGGCGGCAGTGGCGCAAAAGCAACATGAAGACCATGTCGGCCATCTACCAGAAGGTGCGCCACCGGCT
CAACGACGACTGGGCCTACGGCAACGATCTCGATGCGCGGCCCTGGGACTTCCAGGCAGAGGAGTGTGCCCTCCGGGCCA
ACATTGAACGGTTCAACGCCCGGCGCTACGACCGTGCCCACAGCAACCCTGACTTCCTGCCAGTGGACAACTGCCTGCAG
AGTGTCCTGGGCCAGCGGGTGGACCTCCCTGAGGACTTCCAGATGAACTACGACCTCTGGTTAGAAAGAGAGGTCTTCTC
CAAGCCCATATCCTGGGAGGAGCTGCTGCAGTGA
ATGGAGCCGGCAGCCGGTGCCCCGGGCCCGCTGATTGTGAACAACAAGCAGCCGCAGCCGCCGCCACCTCCTCCGCCGGC
AGCTGCGCAGCCTACCGCCGGGGCACCGCGGACGGGCGGAGGCCTCCTGCCCGGAGGCAAGGCCCGCGAGTTCAACCGCA
ACCAGCGTAAAGACTCGGAGGGCTATTCCGAGTCTCCAGACCTGGAGTTTGAGTATGCGGATACAGACAAATGGGCCGCA
GAGCTCTCAGAGCTTTACAGCTACACGGAAGGACCAGAATTCCTGATGAATCGAAAATGCTTTGAGGAAGACTTTAGGAT
ACATGTGACAGACAAGAAGTGGACTGAGCTGGACACCAACCAGCACCGTACCCATGCCATGAGGCTCCTGGATGGCTTGG
AAGTCACTGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCCATTCTCTATGTTGCCCAAGGCACCTTTGGTGAGTGCAGC
TCGGAGGCAGAGGTGCAGTTCTGGATGCGCTACAACATCTTTTTGCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGA
GCTTCTGAACATGGAAATAGACAACAGTGCCGCATGCAGCAGTGCAGTGAGGAAGCCCGCCATCTCCCTGGCTGACAGCA
CAGATCTGAGGGTCCTGCTCAACATCATGTACCTGATTGTGGAGACCGTGCACCAGGAGTGTGAGGGTGACAAGGCAGAG
TGGAGGACCATGCGGCAGACCTTCAGGGCAGAACTGGGCTCCCCGCTGTACAACAATGAGCCGTTTGCCATCATGCTGTT
TGGGATGGTGACCAAATTTTGCAGTGGCCATGCCCCTCATTTCCCAATGAAGAAAGTTCTCCTGCTTCTGTGGAAGACAG
TGTTGTGCACACTGGGTGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGCGCGCGCTCCTGGGCCTGCCCCCGCTG
CCGGAAGACAGCATCAAGGTGATCCGCAACATGAGGGCTGCCTCTCCGCCAGCATCCGCCTCCGATCTGATTGAGCAGCA
GCAGAAGAGGGGCCGCCGTGAGCACAAGGCCCTGATAAAGCAGGACAACTTAGATGCCTTCAATGAACGGGACCCCTACA
AGGCCGATGACTCCCGAGAAGAGGAGGAGGAGAATGACGATGACAACAGTCTGGAGGGAGAGACCTTTCCCTTGGAGCGG
GATGAGGTGATGCCTCCCCCACTGCAGCACCCCCAGACTGACAGGCTCACCTGCCCCAAGGGGCTCCCCTGGGCCCCCAA
GGTCAGAGAGAAGGACATTGAGATGTTCCTCGAGTCTAGCCGCAGCAAATTCATAGGTTACACTCTAGGCAGTGACACGA
GCACCATAGTAGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGCACAAGTACACATCCATTGCTGAG
GTCCAGGCGCAGATGGAAGAGGAGTACCTCCGTTCGCCTCTCTCAGGGGGAGAAGAGGAGGTTGAACAGGTCCCTGCAGA
AACTCTCTACCAAGGCCTGCTCCCCAGCCTGCCTCAGTACATGATCGCCCTTCTGAAGATCCTGCTGGCTGCAGCCCCCA
CCTCGAAAGCCAAAACCGACTCAATCAACATCCTCGCCGATGTCCTTCCTGAAGAGATGCCCACCACAGTGTTGCAGAGC
ATGAAGCTGGGGGTGGACGTGAACCGCCACAAAGAGGTTATTGTGAAGGCCATTTCTGCTGTGTTACTGCTGCTGCTCAA
GCACTTTAAGCTGAACCATGTCTACCAGTTTGAATACATGGCCCAGCACCTGGTGTTTGCCAACTGCATCCCTTTGATCC
TGAAGTTCTTCAATCAAAACATCATGTCCTACATCACTGCCAAAAATAGCATTTCGGTCCTGGACTACCCTCACTGTGTG
GTGCACGAGCTACCAGAGCTGACGGCGGAGAGTCTGGAAGCAGGTGACAACAACCAGTTTTGCTGGAGGAACCTCTTTTC
TTGTATCAATCTGCTTCGCATCTTGAACAAGCTGACTAAATGGAAGCACTCAAGGACAATGATGCTGGTGGTGTTCAAGT
CGGCGCCCATCCTGAAGCGGGCCCTGAAGGTGAAGCAGGCCATGATGCAGCTGTACGTGCTGAAGCTGCTCAAGGTACAG
ACCAAGTACCTGGGGCGGCAGTGGCGCAAAAGCAACATGAAGACCATGTCGGCCATCTACCAGAAGGTGCGCCACCGGCT
CAACGACGACTGGGCCTACGGCAACGATCTCGATGCGCGGCCCTGGGACTTCCAGGCAGAGGAGTGTGCCCTCCGGGCCA
ACATTGAACGGTTCAACGCCCGGCGCTACGACCGTGCCCACAGCAACCCTGACTTCCTGCCAGTGGACAACTGCCTGCAG
AGTGTCCTGGGCCAGCGGGTGGACCTCCCTGAGGACTTCCAGATGAACTACGACCTCTGGTTAGAAAGAGAGGTCTTCTC
CAAGCCCATATCCTGGGAGGAGCTGCTGCAGTGA
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_1104 | 74.70 | 58.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000004063 retrocopies