Parental gene:

MKRN1, ENSOPRG00000010353

Aliases:None
Description:makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_2089:108639..127935(-)


>ENSOPRG00000010353
ATGGCGGAGGCTGCAGCTCCCGGAACAACAGCCACAACATCAGGAGCAGGAGCGGCAGCGGCGGTGGTGGCAGCGGCCTC
CCCCACCCCTATCCCCACAGTCACCGCCCCGTCCCCGGGGGCGGGAGGAGGGGGCGTCGGCCACGAAGGCGGCGGCGGCG
GCTGGACCAAACAGGTCACCTGCAGGTATTTTATGCATGGGGTTTGTAAGGAAGGCGATAACTGTCGCTATTCGCACGAC
CTCTCGGATAGTCCTTACGGCATAGTGAGCGAGTATTTCCAGCGAGGGTACTGTATTTATGGAGACCGCTGCAGGTATGA
ACACAGCAAACCATTGAAGCAGGAGGACACTACTGCCACCGACCTAGCTGCAAAACCTTCCCTTGCTGCCTCCTCAAGTC
TCCCCTCGGTAGTTGGACCGCTCGCGGAAATGAATACAGGCGAAACCGAGTCACGAAATTCAAACTTTGCAACTGTAGGA
GCAGGTTCAGAGGACTGGGTCAATGCCATTGAGTTTGTTCCTGGGCAACCCTACTGTGGCCGTACTGCCTCTTCCTGCAC
TGAAGCACCCCCGCAGGGCTCAGTGACCCAGGAAGAATCAGAGAAAGAGCAAACCGCTGCGGAAACCAAGAAGCAGCTTT
GCCCCTATGCTGCAGTGGGAGAGTGCCGCTATGGGGAGAACTGTGTGTATCTCCATGGAGACTCCTGTGACATGTGTGGG
CTGCAGGTGCTGCACCCGACGGATGCTGCCCAAAGGTCTCAGCACATCAAATCCTGCATCGAGGCCCATGAGAAGGACAT
GGAGCTCTCGTTTGCAGTACAGCGCAGCAAGGACTTGCTCTGTGGCATCTGTATGGAGGTGGTCTATGAGAAGGCCAACC
CCAGCGAGCGCCGCTTCGGCATCCTCTCCAACTGCAGCCACACCTACTGTCTCAAGTGCATCCGCAAGTGGAGGAGTGCT
AAGCAGTTTGAGAGCAAGATCATAAAGTCCTGCCCAGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGTACTG
GGTGGAGGAGAAAGAAGAGAAGCAGAAACTCATTCAGAAATACAAGGAGGCCATGAGCAACAAGGCGTGCAGGTATTTTG
ATGAAGGCCGTGGGAGCTGCCCATTTGGAGGGAACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGAGCCA
CAGAGACAGAAAGTGGGAACATCAAGCAGATACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNACCCCTTTTGACAACGACGACGAAGAGGTGGTCACCTTTGAGCTGGGCGAGATGTTGCTCATGC
TCCTGGCTGCGGGCGGGGACGACGAGCTGACAGACTCTGAAGACGAGTGGGACTTGTTCCACGATGAGCTGGAAGATTTT
TATGACTTGGATCTATAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008306 possible_ortholog 2 retrogenes
retro_btau_401, retro_btau_943,
Canis familiaris ENSCAFG00000003953 possible_ortholog 2 retrogenes
retro_cfam_2157, retro_cfam_253,
Callithrix jacchus ENSCJAG00000013474 possible_ortholog 2 retrogenes
retro_cjac_210, retro_cjac_2991,
Cavia porcellus ENSCPOG00000000948 ortholog_one2one 1 retrogene
retro_cpor_109,
Gorilla gorilla ENSGGOG00000023977 possible_ortholog 4 retrogenes
retro_ggor_119, retro_ggor_2813, retro_ggor_3031, retro_ggor_381,
Macaca mulatta ENSMMUG00000010420 possible_ortholog 3 retrogenes
retro_mmul_191, retro_mmul_2597, retro_mmul_76,
Procavia capensis ENSPCAG00000014683 ortholog_one2one 1 retrogene
retro_pcap_19,
Pongo abelii ENSPPYG00000018057 possible_ortholog 3 retrogenes
retro_pabe_3435, retro_pabe_3776, retro_pabe_947,
Tupaia belangeri ENSTBEG00000004564 ortholog_one2one 2 retrogenes
retro_tbel_1410, retro_tbel_71,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_1073 68.63 52.58
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Download FASTA sequences of all ENSOPRG00000010353 retrocopies